Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq4 237 2e-57 seq5 149 7e-31 >seq4 Length=5903436 Score = 237 bits (262), Expect = 2e-57 Identities = 516/766 (67%), Gaps = 20/766 (3%) Strand=Plus/Plus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 ||||| || ||| | || ||| ||||| || | ||| ||| ||||| ||| || Sbjct 5782887 ATGCGGGTTGCCGTCGGCATCTGGGGTGATGATGTCGAGCGCGTCATCGAGACCTACAAC 5782946 Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314 | ||| | || | ||| || || ||| |||| ||||| ||||| || || || Sbjct 5782947 CTGATGTCCAGCAAATTCTTCACTCATGCCTCGCCCACCCTATTCAATGCGGGCACCCCC 5783006 Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374 || |||| |||| ||||||||| || | |||||||| ||| ||||| |||||| Sbjct 5783007 CAGGCTCAACTGTCTTCCTGCTTCCTCGTCGACATGAAGGAGGACAGCATCGAGGGCATC 5783066 Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434 ||||| || |||||| |||||| || |||||| | | || || || || | || Sbjct 5783067 TACGACACCCTCAAGACCTGTGCCATGATTTCCAAGATGGCTGGCGGCATTGGCCTGAAC 5783126 Query 53435 TGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492 || | || ||||||| | || | || || || |||||| | || | | Sbjct 5783127 G--TCCACCGCATCCGTGCCACTGGTTCTTACATTGCCGGCACCAACGGCACCTCCAACG 5783184 Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552 | ||| | || ||||| || || ||||||||||| ||||| || ||| |||||||||| Sbjct 5783185 GTATCATCCCCATGCTGCGTGTGTTCAACAACACCGCCCGCTATGTCGACCAGGGTGGCA 5783244 Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612 |||||| || | |||||||||||||| |||||||||||||| || | | |||| Sbjct 5783245 ACAAGCGCCCCGGCGCTTTCGCCATCTACCTTGAGCCGTGGCACGCTGATGTCTTCGAGT 5783304 Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTACA 53671 | || || ||||| ||| || || | || ||| | || ||| || || || || Sbjct 5783305 TCCTGGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCG-TGCTCGCGATCTATTCCTC 5783363 Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731 || || ||||| || || ||||||||| | || |||||| ||| || ||| ||| Sbjct 5783364 GCCCTCTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACGGCGACTGGACTCTG 5783423 Query 53732 ATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790 |||||||| ||||||||||| || ||| | | || ||| || || ||||| | | | Sbjct 5783424 ATGTGCCCCAACGAGTGCCCTGGTCTCGCCGACTG-CTATGGCGACGAGTTCGAGGCTCT 5783482 Query 53791 GTATCGGACGTAC------GCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGA 53844 ||| | |||| || | |||| || ||||| ||| ||| | | Sbjct 5783483 GTACGAAAAGTACGAGAAGGCGGGCAAGGGTCG------GAAGACCATCAGGGCCCAGAA 5783536 Query 53845 GGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAA 53904 | | ||| |||| |||||| || |||| ||||| || | || | |||| ||||| Sbjct 5783537 GCTCTGGTATGCCATCCTCGAGGCCCAGACCGAGACTGGCAACCCCTTCATGCTTTACAA 5783596 Query 53905 GGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATC 53950 ||| | |||| ||||||||||||||||||| ||||| |||| Sbjct 5783597 GGACCACGCCAACAGGAAGAGCAACCAGAAGAACCTCGGCACCATC 5783642 Score = 127 bits (140), Expect = 2e-24 Identities = 555/855 (65%), Gaps = 40/855 (5%) Strand=Plus/Plus Query 55097 GACTTTGACAAGCTTCACGAAGTGACGC--GT-GTTGTGACTCGGAACCTGAACCGGGTC 55153 ||||| | ||||| ||||| || || | || ||||||| ||||||||||| | || Sbjct 5783760 GACTTCAAGAAGCTGCACGAGGTCACACAGGTCGTTGTGA---GGAACCTGAACAAGATC 5783816 Query 55154 ATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCCC 55213 |||||| || |||||||| | | | ||| ||||| |||| | || || || ||| Sbjct 5783817 ATCGACGTCAACTACTACCCCGTTCAGGAGGCCCGCAACAGCAACATGCGCCATCGTCCC 5783876 Query 55214 ATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCCTTCGAC 55273 |||| | ||||| ||||| |||||||| |||| | ||| | |||| ||||| Sbjct 5783877 ATCGGTCTGGGTGTTCAGGGTCTGGCCGACGCCTTCCTCGCCCTCCGCATGCCTTTCGAG 5783936 Query 55274 TCGGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCT 55332 || || || || | ||| || | ||||| || | ||||||| || || || Sbjct 5783937 TCTCCCGAGGCCCGTGAGCTCAACAAGCAGATCTTTGAGAC-CATCTACCACGCTGCCCT 5783995 Query 55333 CGAGGA-GTCGTGTCATCTGGCT-ATGAGCGAGGGGACCTACGAGACGTTCCGTGATTCG 55390 || | ||| || | || ||| | |||| |||| |||||| |||| | | || Sbjct 5783996 -GACCATGTCCTGCAAGCTTGCTCAGGAGC-AGGGCACCTACTCCACGTACGAGGGCTCC 5784053 Query 55391 CCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGGGG---CAAGTC---TGACCCCATG 55444 || | | ||||| | ||||||| |||| | |||| |||| | ||||| | | Sbjct 5784054 CCTGTCTCCCAGGGAATCCTCCAGTACGATATGTGGGATGTCAAGCCCACTGACCTCTGG 5784113 Query 55445 TTT---GACAAGTTGAAGCATGACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGTG 55501 | ||| ||||| | | || | | || | |||||| | ||||||| Sbjct 5784114 GATTGGGACTCTCTGAAGGAGCAGATCAAGCAGCACGGAGTCCGCAACAGCTTGCTCGTT 5784173 Query 55502 GCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCCG 55561 || || ||||| || || || || |||||||| | ||||||||||| |||||||| Sbjct 5784174 GCCCCCATGCCCACTGCTTCCACATCTCAGATCCTTGGCAACAACGAATGCTTCGAGCCT 5784233 Query 55562 TACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAACAAG 55621 ||||| | |||||||||| |||||| || || || || || | ||||| Sbjct 5784234 TACACCTCGAACATCTACCAGCGCCGCGTGCTTGCTGGCGAATTCCAGGTTGTCAACCCC 5784293 Query 55622 CACCTCGTCAAGGACCT-GCAGAA---GATCAACAAGTG-GAACCCGCAGATCAAGA--C 55674 || |||||||||| | || | || | || || || || |||| | Sbjct 5784294 TGGCTGCTCAAGGACCTTGTCGACATGGGTCT-CTGGTCTGATGCC----ATGAAGAACC 5784348 Query 55675 GGATATTGTGCG-GAACGGGGGGTCCGTCCAGAA--TCTGGAGATTCCTCTGCGTC-TCA 55730 | || | || |||||| ||||| ||||| || | ||| || ||| Sbjct 5784349 GTATCATCGCCGAGAACGGC---TCCGTTCAGAACATCCCTAACATCCCAGCCGAAGTCA 5784405 Query 55731 AGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTG 55790 ||| | ||| ||| || ||||||||| | ||| | | || | ||| |||| Sbjct 5784406 AGGCCCTGTACAAGACCGTCTGGGAGATTTCCCAGCGTGCTGTCGTTCAGATGGCCGCTG 5784465 Query 55791 ATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCAC 55850 | || ||||| | |||||||||||||||||| ||||||||| ||| || | || | Sbjct 5784466 ACCGCGGTGCCTTCATCGACCAGTCCCAGTCGCTGAACATCCATATGAAGGACCCCACCA 5784525 Query 55851 TGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGT 55910 ||| |||| | | | |||||||| || |||||| || ||||||||||| |||| Sbjct 5784526 TGGGCAAGATCACCAGCATGCACTTCGCGGGCTGGAAGCTCGGTCTCAAGACGGGAATGT 5784585 Query 55911 ACTATCTGCGGACCC 55925 |||| ||||| |||| Sbjct 5784586 ACTACCTGCGTACCC 5784600 >seq5 Length=5645814 Score = 149 bits (164), Expect = 7e-31 Identities = 210/293 (72%), Gaps = 4/293 (1%) Strand=Plus/Minus Query 117310 AATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACT 117369 ||| ||||||| ||| ||||| || |||||| || | ||| | |||||| | || || Sbjct 3721127 AATATAACGAGCGCTAGCAGCGTCAGAGCCACCTGCCAAACGAGAACCGAAGTTACCGCT 3721068 Query 117370 CGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGT 117429 || || | | ||| | |||||||| ||| ||||||||||| |||| | | ||| || Sbjct 3721067 GGGTTCGAGAACGTTGATGTTGTTGGAGCCAACAAAGTTTTGGGCCAGGCCAATAATGGT 3721008 Query 117430 ACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAG 117489 |||||| | || || |||||||| || | || ||| | ||||| || || || Sbjct 3721007 CTGCTGGAGGGACATTTCGCCGTGGTGATAGGCGGCCTTCTCAGAGACGTAACCGGCAAG 3720948 Query 117490 CTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTG 117547 || | | |||||| ||| ||||| ||||| |||||| ||||||| | | |||||| Sbjct 3720947 CTCAACGACCTTCTGGTCCTTGACG--AGGTTTCTCTTGAAGCAGGCAAAGAGGACCTTG 3720890 Query 117548 CGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGCTTGATGTC 117600 || |||| |||||||||||||| ||| ||||| |||||| || |||| Sbjct 3720889 CGTTGACCGGGCTTCAGACCATCGATCACAGACGGGATGGAACGCATGTTGTC 3720837 Score = 82.4 bits (90), Expect = 8e-11 Identities = 192/290 (66%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 152035 ATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAG 152094 || || || | ||| || || || ||||||||||| || | || || | || | Sbjct 3721126 ATATAACGAGCGCTAGCAGCGTCAGAGCCACCTGCCAAACGAGAACCGAAGTTACCGCTG 3721067 Query 152095 GGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTG 152154 || ||||| | ||||| |||||||| ||| || || || || |||| | ||| || Sbjct 3721066 GGTTCGAGAACGTTGATGTTGTTGGAGCCAACAAAGTTTTGGGCCAGGCCAATAATGGTC 3721007 Query 152155 CCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAAC 152214 ||| || | ||| ||||||||||| || | || ||| | || ||| || || | | Sbjct 3721006 TGCTGGAGGGACATTTCGCCGTGGTGATAGGCGGCCTTCTCAGAGACGTAACCGGCAAGC 3720947 Query 152215 TGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGC 152274 | | |||||| |||| | ||||| |||||| ||||| | | |||||||| Sbjct 3720946 TCAACGACCTTCTGGTCCTTGACGAGGTTTCTCTTGAAGCAGGCAAAGAGGACCTTGCGT 3720887 Query 152275 TGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324 || || |||| ||| || | ||| || || |||||| || |||| Sbjct 3720886 TGACCGGGCTTCAGACCATCGATCACAGACGGGATGGAACGCATGTTGTC 3720837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215938438200