Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 >seq2 Length=7157451 Score = 96.9 bits (106), Expect = 3e-15 Identities = 252/383 (66%), Gaps = 16/383 (4%) Strand=Plus/Plus Query 30082 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 30141 |||||| ||||| || ||||| | || || ||||||||| ||| | | | ||| Sbjct 6949595 GTGGCATGGAGGCAGGGCCATCTGCTTCAGGTGGGCGGGGTTCCATGCGGAGAGCAGGAT 6949654 Query 30142 GCGCCTGTCTTCTGGGTTGTTCCTGAT------GAGGTCCACGGCGTTTTGCAGCTGATC 30195 ||||| ||| | || ||||| | | || | || ||||| ||||| || Sbjct 6949655 GCGCCGGTCGTACGGCGTGTTCTTCAGCTTGTAGATGACCTCGGCG------AGCTGGTC 6949708 Query 30196 CACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCA 30255 || ||| ||||| ||| || | | | ||| ||| || || |||||||||| ||| Sbjct 6949709 GACTCCCTGCCCCGTGTAATCGGTCTTGGCGTCGACGTATTCGGCGCCGAAATGCCGCCA 6949768 Query 30256 CTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTC 30315 |||||| ||||| || || || || || ||| | || | ||| || ||| |||| Sbjct 6949769 CTGGAAGCCGTATACGGGGCCGAGATCGCCCACCTCGCGGTGGGAGAGGCCGACGCTGTC 6949828 Query 30316 CAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTTCTCAGAGAGCTCT 30373 | || || | || |||||| ||||||||||||| || || |||| | ||| | | Sbjct 6949829 GAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACGCCGGCTTCGCTGAGTG--CC 6949886 Query 30374 TTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAG 30433 |||| ||| ||| || |||||| |||||||| | | ||||| | || Sbjct 6949887 AGGGAGGACGTGTTCCCCTCGATGAACCAGAGCAGCTCGGCGATAACGGCGCGCAGGAAC 6949946 Query 30434 ACCCTCTTGGTCGTGAGGAGGGG 30456 || | || ||||| |||||||| Sbjct 6949947 ACGCGTTTTGTCGTCAGGAGGGG 6949969 Score = 86.0 bits (94), Expect = 5e-12 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 29848 TCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGC 29907 ||| || || ||||| |||||| ||||||| | || | || || | || || || || Sbjct 6949313 TCTCGGTTCTCTCTCCAGCTGAATCTTCAGGGCGTCGATGTGGTCAACATACACATGCGC 6949372 Query 29908 GTCTCCCAGGTTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGT 29966 ||| |||| | ||| | || || |||||| | || || | | || ||||||| Sbjct 6949373 GTCGCCCATGACGTGCGTCAGGCT-TCCCGGAACCAGGTCGCATGCTCGCGCAATCATGT 6949431 Query 29967 ACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACC 30026 |||||||| | ||||||||| || || || || || || || |||||||| | |||| Sbjct 6949432 GAGTGAGGAGGGCGTAGCTGGCAATATTGAACGGCACGCCCAGGCCCATGTCGCAGGACC 6949491 Query 30027 TCTGGTAGAGCTGACA 30042 ||||||| | ||| || Sbjct 6949492 TCTGGTACAACTGGCA 6949507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310355432828