Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 9e-16 >seq2 Length=7157451 Score = 98.7 bits (108), Expect = 9e-16 Identities = 273/408 (67%), Gaps = 12/408 (3%) Strand=Plus/Plus Query 6721 ATTCGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 || || ||||||||| || || ||||||| || || || |||||| | || | Sbjct 6949568 ATACGAGACGTAGAACTGCGCGAACATGTGGCATGGAGGCAGGGCCATCTGCTTCAGGTG 6949627 Query 6781 CTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTC 6840 |||||||| ||| | | || ||| | | ||| | || | ||||| ||| Sbjct 6949628 GGCGGGGTTCCATGCGGAGAGCAGGATGCGCCGGTCGTACGGCGTGTTCTTCAGCTTGTA 6949687 Query 6841 GATCACGTACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGA 6898 ||| || | | || |||||||| ||||||| |||| || || | ||| || | || Sbjct 6949688 GATGACCT-CGGCGAGCTGGTCGACTCCCTGCCCCGTGTAATCGGTCTTGGCGTCGACG- 6949745 Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || || || || || | ||||||||| ||||| || ||||| | |||||| |||| Sbjct 6949746 TATTCGGCGCCGAAATGCCGCCACTGGAAGCCGTATACGGGGCCGAGATCGCCCACCTCG 6949805 Query 6959 CGAGATGGGAA---CCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATC 7015 || ||||| || |||| ||| || || || || ||||||| ||||||||||| Sbjct 6949806 CGG--TGGGAGAGGCCGACGCT-GTCGAGGAACTCGCGCGACCCGTTGCCGTCCCAGATC 6949862 Query 7016 TTCACCCCCCGGGACG-AGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAG 7074 || | | || | || ||| || || | |||| |||| | |||||| ||||| Sbjct 6949863 TTGA-CGCCGGCTTCGCTGAGTGCCAGGGAGGACGTGTTCCCCTCGATGAACCAGAGCAG 6949921 Query 7075 CTCCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122 ||| ||| ||| | | | |||| ||||| |||||||| || || Sbjct 6949922 CTCGGCGATAACGGCGCGCAGGAACACGCGTTTTGTCGTCAGGAGGGG 6949969 Score = 98.7 bits (108), Expect = 9e-16 Identities = 273/408 (67%), Gaps = 12/408 (3%) Strand=Plus/Minus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 || || |||||||| ||||| |||| | | | ||| ||| |||||||| |||||| Sbjct 6949969 CCCCTCCTGACGACAAAACGCGTGTTCCTGCGCGCCGTTATCGCCGAGCTGCTCTGGTTC 6949910 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCT-CGTCCCGGGGGGTGAAGATCTGGGACGC 34341 | |||| |||| | || || ||| || | || | | ||||||||||||| Sbjct 6949909 ATCGAGGGGAACACGTCCTCCCTGGCACTCAGCGAAGCCGGCG-TCAAGATCTGGGACGG 6949851 Query 34342 TCACGGGTCTCGAGACTTTCTGGACAAGCGGGGG---TTCCCATCTCGGGAGGAGGGCGA 34398 ||||||| || || || || ||| |||| || ||||| || |||| |||||| Sbjct 6949850 CAACGGGTCGCGCGAGTTCCTCGAC-AGCGTCGGCCTCTCCCA--CCGCGAGGTGGGCGA 6949794 Query 34399 CTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGA 34458 | ||||| || ||||| ||||||||| | || || || || || || || | || | Sbjct 6949793 TCTCGGCCCCGTATACGGCTTCCAGTGGCGGCATTTCGGCGCCGAATA-CGTCGACGCCA 6949735 Query 34459 AG-CGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAGTACGTGATCGACACCTTGAAG 34516 || | || || |||| ||||||| |||||||| || | | || ||| ||| ||||| Sbjct 6949734 AGACCGATTACACGGGGCAGGGAGTCGACCAGCTCGCCG-AGGTCATCTACAAGCTGAAG 6949676 Query 34517 CGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTG 34576 | || | ||| | | ||| || | | ||| |||||||| | || | | Sbjct 6949675 AACACGCCGTACGACCGGCGCATCCTGCTCTCCGCATGGAACCCCGCCCACCTGAAGCAG 6949616 Query 34577 ATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||| || || || ||||||| || || ||||||||| || || Sbjct 6949615 ATGGCCCTGCCTCCATGCCACATGTTCGCGCAGTTCTACGTCTCGTAT 6949568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262349570480