Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 3e-13 seq3 89.7 3e-13 >seq6 Length=5170228 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || |||||||| ||||| || |||||||| ||||| || || | Sbjct 5110411 ATGCAGATTTTCGTCAAGACCCTCACCGGAAAGACCATCACTCTGGAAGTCGAGTCTTCT 5110352 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| || || | || || || || Sbjct 5110351 GACACAATCGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 5110292 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || ||||| ||||| || ||||||| | ||||| | || |||||| Sbjct 5110291 CAGCGCCTCATCTTTGCGGGCAAGCAGTTGGAAGATGGCCGCACCCTGTCTGACTACAAC 5110232 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 5110231 ATCCAGAAGGAGTCTAC 5110215 >seq3 Length=5970797 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||||||||| || || ||||| || || || || || | Sbjct 631135 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCGTCC 631076 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || || ||||| || || | || || || || Sbjct 631075 GACACCATCGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 631017 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || |||||||| || || || |||| ||||| | ||| ||||| Sbjct 631016 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAA 630957 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 630956 CATCCAGAAGGAGTCCAC 630939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009562924572