Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 4e-13 >seq2 Length=7157451 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 27114 TCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGC 27173 ||| || || ||||| |||||| ||||||| | || | ||| || | || || || || Sbjct 6949313 TCTCGGTTCTCTCTCCAGCTGAATCTTCAGGGCGTCGATGTGGTCAACATACACATGCGC 6949372 Query 27174 GTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGT 27232 ||| |||| | ||| | || || |||||| | || || | | || ||||||| Sbjct 6949373 GTCGCCCATGACGTGCGTCAGGCT-TCCCGGAACCAGGTCGCATGCTCGCGCAATCATGT 6949431 Query 27233 ACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACC 27292 |||||||| | ||||||||| || || || || || || || |||||||| | |||| Sbjct 6949432 GAGTGAGGAGGGCGTAGCTGGCAATATTGAACGGCACGCCCAGGCCCATGTCGCAGGACC 6949491 Query 27293 TCTGGTAGAGCTGACA 27308 ||||||| | ||| || Sbjct 6949492 TCTGGTACAACTGGCA 6949507 Score = 87.8 bits (96), Expect = 1e-12 Identities = 250/383 (65%), Gaps = 16/383 (4%) Strand=Plus/Plus Query 27348 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 27407 |||||| ||||| || ||||| | || || ||||||||| ||| | | | ||| Sbjct 6949595 GTGGCATGGAGGCAGGGCCATCTGCTTCAGGTGGGCGGGGTTCCATGCGGAGAGCAGGAT 6949654 Query 27408 GCGCCTGTCTTCTGGGTTGTTCCTGAT------GAGGTCCACGGCGTTTTGCAGCTGATC 27461 ||||| ||| | || ||||| | | || | || ||||| ||||| || Sbjct 6949655 GCGCCGGTCGTACGGCGTGTTCTTCAGCTTGTAGATGACCTCGGCG------AGCTGGTC 6949708 Query 27462 CACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCA 27521 || ||| ||||| ||| || | | ||| ||| || || |||||||||| ||| Sbjct 6949709 GACTCCCTGCCCCGTGTAATCGGTCTTGGCGTCGACGTATTCGGCGCCGAAATGCCGCCA 6949768 Query 27522 TTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTC 27581 ||||| ||||| || || || || || ||| | || | ||| || ||| |||| Sbjct 6949769 CTGGAAGCCGTATACGGGGCCGAGATCGCCCACCTCGCGGTGGGAGAGGCCGACGCTGTC 6949828 Query 27582 CAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTTCTCGGAGAGCTCT 27639 | || || | || |||||| ||||||||||||| || || |||| | ||| | | Sbjct 6949829 GAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACGCCGGCTTCGCTGAGTG--CC 6949886 Query 27640 TTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAG 27699 |||| ||| ||| || |||||| |||||||| | | ||||| | || Sbjct 6949887 AGGGAGGACGTGTTCCCCTCGATGAACCAGAGCAGCTCGGCGATAACGGCGCGCAGGAAC 6949946 Query 27700 ACCCTCTTGGTCGTGAGGAGGGG 27722 || | || ||||| |||||||| Sbjct 6949947 ACGCGTTTTGTCGTCAGGAGGGG 6949969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369507159469679