Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq6 172 1e-37 seq3 158 3e-33 seq5 143 6e-29 seq1 89.7 1e-12 >seq6 Length=5170228 Score = 172 bits (190), Expect = 1e-37 Identities = 177/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| ||||| || ||||| | || || || |||||||||||||||| Sbjct 5110184 ACCACCACGCAGACGAAGGACGAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGA 5110243 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || | || || || |||||||| | || || ||||| || Sbjct 5110244 CAGGGTGCGGCCATCTTCCAACTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCGGGAGG 5110303 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 || ||||||||||| |||||| ||||| || ||| | ||||| ||||| |||| |||| Sbjct 5110304 GATGCCCTCCTTGTCCTGGATC-TTGCTCTTCACGTTGTCGATTGTGTCAGAAGACTCGA 5110362 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| |||||||| ||||| || || | ||||| ||||| |||||||| Sbjct 5110363 CTTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTGACGAAAATCTGCAT 5110411 Score = 170 bits (188), Expect = 4e-37 Identities = 168/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || || ||||| || | ||| || || ||||| |||||||| | Sbjct 5110413 CCACCACGCAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAG 5110472 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| ||||| || ||||| || |||| ||| || ||||| || Sbjct 5110473 AGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCGGGAGGG 5110532 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| |||||||| | || ||| | ||||| || || |||| ||||| Sbjct 5110533 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGGAAGACTCGACC 5110592 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 ||||||||||| ||||| || |||| ||||| |||| Sbjct 5110593 TCGAGAGTGATGGTCTTTCCGGTCAGGGTCTTGACGA 5110629 Score = 150 bits (166), Expect = 4e-31 Identities = 142/181 (78%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||| |||||||| | || |||||||||||||| ||||| || ||||| || Sbjct 5052161 TCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAA 5052102 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| ||| || ||||| || |||||||||||||| |||||||| | || ||| | Sbjct 5052101 ATCAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 5052042 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| || || |||| ||||| ||||||||||| ||||| || |||| ||||| ||| Sbjct 5052041 TCGATGGTATCGGAAGACTCGACCTCGAGAGTGATGGTCTTTCCGGTCAGGGTCTTGACG 5051982 Query 283089 A 283089 | Sbjct 5051981 A 5051981 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || || ||||| | || || || ||||||||||| || | Sbjct 5109957 CCGCCACGAAGACGCAGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAATCCGAC 5110016 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || ||||| || || || || || || ||||||| || || |||||| ||| Sbjct 5110017 AGGGTACGTCCATCTTCCAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGA 5110076 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||| || |||||||| | || ||| ||||||| ||||| || | ||||||| Sbjct 5110077 ATACCCTCCTTATCCTGGATCTTCGACTTCACGTTATCGATCGTGTCGGACGATTCGACT 5110136 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || ||||| || || | ||||| || || |||||||| Sbjct 5110137 TCCAGGGTAATAGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 5110183 Score = 140 bits (154), Expect = 7e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || || || ||||| || | |||| || || |||||||||||||| Sbjct 5051912 CCACCGCGAAGACGGAGAACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTT 5051853 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || || || || || || || | ||| || || || ||| Sbjct 5051852 AGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGGA 5051793 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| | || ||| | || || || ||||| | || || Sbjct 5051792 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCCGAGGACTCCACC 5051733 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || |||| |||||| ||||| |||||||| Sbjct 5051732 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 5051686 Score = 140 bits (154), Expect = 7e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || || || ||||| || | |||| || || |||||||||||||| Sbjct 5110698 CCACCGCGAAGACGGAGAACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTT 5110757 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || || || || || || || | ||| || || || ||| Sbjct 5110758 AGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGGA 5110817 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| | || ||| | || || || ||||| | || || Sbjct 5110818 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCCGAGGACTCCACC 5110877 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || |||| |||||| ||||| |||||||| Sbjct 5110878 TCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 5110924 >seq3 Length=5970797 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| || || || || | ||| || || |||||||||||||| | Sbjct 630909 CCACCACGGAGGCGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 630968 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || ||||| ||||||| || || ||||| || Sbjct 630969 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 631028 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| | || || | ||||| ||||| || | || || Sbjct 631029 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCACC 631088 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||||||||| | ||||| ||||| |||||||| Sbjct 631089 TCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 631135 >seq5 Length=5645814 Score = 143 bits (158), Expect = 6e-29 Identities = 139/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || |||||||||||||| || || || ||||| |||||| Sbjct 3291301 TTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATC 3291360 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || || ||||| || || ||||||||||| |||||||| | || ||| | || Sbjct 3291361 AGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCA 3291420 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || |||||||||| || || ||||| ||||| ||||| ||||| | ||||| ||||| Sbjct 3291421 ATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTAAGGGTCTTCACGAA 3291479 Score = 113 bits (124), Expect = 9e-20 Identities = 154/214 (72%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | ||| ||| | || ||| |||| |||||||||| || ||||||| Sbjct 2728119 AGGAGTTCCTCACCGAAGCTCTCCCCTGCGGTCTGCTCGGCATGAACTCTACTCTCATGA 2728060 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 ||| || || || || || || || ||| | |||| || || || ||||||| || | Sbjct 2728059 AGCAGTACATTGAGTTTGTTGCCGACCGTCTCCTCGTCGCCCTCGGCAACGAGAAGGTCT 2728000 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | || || |||||||||| || |||||| ||| || ||| || || || |||| Sbjct 2727999 ACAAGGTCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGCGGCAAGACCAACT 2727940 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGC 230403 ||||||| ||||||||| ||| || || ||||| Sbjct 2727939 TCTTCGAGAAGCGTGTCGCCGACTACCAGAAGGC 2727906 >seq1 Length=7510044 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 316983 GTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAA 317042 ||||||||| ||||| || | | || || | |||| | | ||||| || || | Sbjct 4630111 GTCGAGGTCGTGCTCGACGAAGACGGTCTTGACCTCGTCCTGCTTGGGGAAACCCTCGAC 4630170 Query 317043 CTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAG 317102 ||| |||| || || | ||| || || |||||||| | ||| ||||| |||||||| Sbjct 4630171 CTGCTCGTTGTTGATGGCGCGCATGAGAGTAGACTTGCCGGAACCGTTGGGACCGCAAAG 4630230 Query 317103 ACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACC 317162 ||| || || | || |||||| || | |||| | ||| || |||||||| |||| Sbjct 4630231 ACCGTAGCGCTGGCCGCGCTTCAGGCGAAGATGGGTCTGGTTGAGCAGAATCTTGGCACC 4630290 Query 317163 ATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 || || || ||||| || | || ||||||||||| Sbjct 4630291 GTAGGCAAGGGAGAAGGTGCAGTTGCAAAGGTCCTCGCC 4630329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739079297886