Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01]
9 sequences; 40,320,693 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq3 156 3e-33
seq6 131 1e-25
seq5 111 1e-19
>seq3
Length=5970797
Score = 156 bits (172), Expect = 3e-33
Identities = 167/219 (76%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
|| ||| |||||||| ||| |||||| ||||||||||| |||| ||| ||| ||||
Sbjct 630923 CAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTC 630982
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
|| |||||||| ||||| ||||||| |||||||| || | || | || ||||| ||
Sbjct 630983 CTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 631042
Query 44245 CGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302
| ||||| ||| || ||| | |||||||||| || |||||||| | || ||
Sbjct 631043 CTGGATCTTGGACTTGACATTGT--CGATGGTGTCGGACGACTCCACCTCAAGGGTGATA 631100
Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
||||| |||||||||||||| |||||||| |||||| ||
Sbjct 631101 GTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATGGTG 631139
>seq6
Length=5170228
Score = 131 bits (144), Expect = 1e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| |||||||||||||| | || || | || ||||||||||| || || ||
Sbjct 5109992 CTCCTTCTGGATGTTGTAATCCGACAGGGTACGTCCATCTTCCAGCTGCTTTCCAGCGAA 5110051
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
||||| |||||||| || | ||| | ||| ||||| ||| |||||| ||||| |
Sbjct 5110052 GATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTATCCTGGATCTTCGACTTCACGTT 5110111
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || ||||||| ||||| || |||| ||||| ||||| || ||||||||||| ||
Sbjct 5110112 ATCGATCGTGTCGGACGATTCGACTTCCAGGGTAATAGTCTTGCCGGTGAGGGTCTTGAC 5110171
Query 44326 GAAGATTTGCAT 44337
||||| |||||
Sbjct 5110172 AAAGATCTGCAT 5110183
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| |||||| |||||| ||||||||||| ||| || ||| |||| ||
Sbjct 5051894 ACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGACCGTCCTCG 5051835
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || || || | |||||||||||| | || | || ||||| |||
Sbjct 5051834 AGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGG 5051775
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | ||||| || | ||| |||||||| | || || |||||
Sbjct 5051774 ATCTTGGACTTGACGTTGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGATGGTCTTG 5051715
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
|| || || ||||| |||||||| |||||| ||
Sbjct 5051714 CCAGTCAGAGTCTTGACGAAGATCTGCATGGTG 5051682
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| |||||| |||||| ||||||||||| ||| || ||| |||| ||
Sbjct 5110716 ACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGACCGTCCTCG 5110775
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || || || | |||||||||||| | || | || ||||| |||
Sbjct 5110776 AGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGG 5110835
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | ||||| || | ||| |||||||| | || || |||||
Sbjct 5110836 ATCTTGGACTTGACGTTGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGATGGTCTTG 5110895
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
|| || || ||||| |||||||| |||||| ||
Sbjct 5110896 CCAGTCAGAGTCTTGACGAAGATCTGCATGGTG 5110928
Score = 109 bits (120), Expect = 4e-19
Identities = 140/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| ||||||||||| || | || ||| | || |||| |||||| || |||||
Sbjct 5110220 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAACTGCTTGCCCGCAAA 5110279
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
||| | |||||||| || | ||| | || ||||| ||| ||||| ||||| |
Sbjct 5110280 GATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTCACGTT 5110339
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || ||||| | || || || |||| || || |||||||| ||||||||||| ||
Sbjct 5110340 GTCGATTGTGTCAGAAGACTCGACTTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTGAC 5110399
Query 44326 GAAGATTTGCATG 44338
||| || ||||||
Sbjct 5110400 GAAAATCTGCATG 5110412
>seq5
Length=5645814
Score = 111 bits (122), Expect = 1e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| |||| ||| ||| | || || |||||||| ||||| ||||
Sbjct 3291299 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 3291358
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267
||| |||||||| || | || | || ||||| ||| ||||| ||| | |
Sbjct 3291359 TCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 3291418
Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327
| |||||||| | || |||||||| | || || ||||| ||||| |||||||||||||
Sbjct 3291419 CAATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTAAGGGTCTTCACGA 3291478
Query 44328 A 44328
|
Sbjct 3291479 A 3291479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990360513553
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |