Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq3 156 3e-33 seq6 131 1e-25 seq5 111 1e-19 >seq3 Length=5970797 Score = 156 bits (172), Expect = 3e-33 Identities = 167/219 (76%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||| |||||||| ||| |||||| ||||||||||| |||| ||| ||| |||| Sbjct 630923 CAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTC 630982 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 || |||||||| ||||| ||||||| |||||||| || | || | || ||||| || Sbjct 630983 CTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC 631042 Query 44245 CGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 | ||||| ||| || ||| | |||||||||| || |||||||| | || || Sbjct 631043 CTGGATCTTGGACTTGACATTGT--CGATGGTGTCGGACGACTCCACCTCAAGGGTGATA 631100 Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||||| |||||||||||||| |||||||| |||||| || Sbjct 631101 GTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATGGTG 631139 >seq6 Length=5170228 Score = 131 bits (144), Expect = 1e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| |||||||||||||| | || || | || ||||||||||| || || || Sbjct 5109992 CTCCTTCTGGATGTTGTAATCCGACAGGGTACGTCCATCTTCCAGCTGCTTTCCAGCGAA 5110051 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||||| |||||||| || | ||| | ||| ||||| ||| |||||| ||||| | Sbjct 5110052 GATCAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTATCCTGGATCTTCGACTTCACGTT 5110111 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || ||||||| ||||| || |||| ||||| ||||| || ||||||||||| || Sbjct 5110112 ATCGATCGTGTCGGACGATTCGACTTCCAGGGTAATAGTCTTGCCGGTGAGGGTCTTGAC 5110171 Query 44326 GAAGATTTGCAT 44337 ||||| ||||| Sbjct 5110172 AAAGATCTGCAT 5110183 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| |||||| |||||| ||||||||||| ||| || ||| |||| || Sbjct 5051894 ACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGACCGTCCTCG 5051835 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || || | |||||||||||| | || | || ||||| ||| Sbjct 5051834 AGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGG 5051775 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | ||||| || | ||| |||||||| | || || ||||| Sbjct 5051774 ATCTTGGACTTGACGTTGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGATGGTCTTG 5051715 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || || ||||| |||||||| |||||| || Sbjct 5051714 CCAGTCAGAGTCTTGACGAAGATCTGCATGGTG 5051682 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| |||||| |||||| ||||||||||| ||| || ||| |||| || Sbjct 5110716 ACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTTAGGGTGCGACCGTCCTCG 5110775 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || || | |||||||||||| | || | || ||||| ||| Sbjct 5110776 AGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGG 5110835 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | ||||| || | ||| |||||||| | || || ||||| Sbjct 5110836 ATCTTGGACTTGACGTTGTCAATGGTATCCGAGGACTCCACCTCAAGGGTGATGGTCTTG 5110895 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || || ||||| |||||||| |||||| || Sbjct 5110896 CCAGTCAGAGTCTTGACGAAGATCTGCATGGTG 5110928 Score = 109 bits (120), Expect = 4e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||||||||| || | || ||| | || |||| |||||| || ||||| Sbjct 5110220 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAACTGCTTGCCCGCAAA 5110279 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | |||||||| || | ||| | || ||||| ||| ||||| ||||| | Sbjct 5110280 GATGAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTCACGTT 5110339 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || ||||| | || || || |||| || || |||||||| ||||||||||| || Sbjct 5110340 GTCGATTGTGTCAGAAGACTCGACTTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTGAC 5110399 Query 44326 GAAGATTTGCATG 44338 ||| || |||||| Sbjct 5110400 GAAAATCTGCATG 5110412 >seq5 Length=5645814 Score = 111 bits (122), Expect = 1e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| |||| ||| ||| | || || |||||||| ||||| |||| Sbjct 3291299 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 3291358 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 ||| |||||||| || | || | || ||||| ||| ||||| ||| | | Sbjct 3291359 TCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 3291418 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | |||||||| | || |||||||| | || || ||||| ||||| ||||||||||||| Sbjct 3291419 CAATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTAAGGGTCTTCACGA 3291478 Query 44328 A 44328 | Sbjct 3291479 A 3291479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990360513553