Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acremonium_20furcatum_20[genbank_20GCA_5F001599815.1_202016-03-01] 9 sequences; 40,320,693 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq3 181 1e-40 seq6 147 2e-30 seq5 136 4e-27 >seq3 Length=5970797 Score = 181 bits (200), Expect = 1e-40 Identities = 181/233 (78%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 ||||| || || || || | ||| || || || ||| ||||||||| ||||| |||||| Sbjct 630906 CCGCCACCACGGAGGCGCAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 630965 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 ||||||||||| |||| || ||||||||||||||||| ||||||||||| ||||| | | Sbjct 630966 GAGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGG 631025 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACT 41810 || | || |||||||||| ||| || ||| || | || | |||||| ||||| Sbjct 631026 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCGGACGACT 631083 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||| | || || || |||||||| || ||||| ||||| ||||||||| Sbjct 631084 CCACCTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATG 631136 >seq6 Length=5170228 Score = 147 bits (162), Expect = 2e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | ||||| || |||||| ||||||||| ||||| |||||| Sbjct 5051913 GCCACCGCGAAGACGGAGAACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCT 5051854 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| |||| ||||||||||| || ||||| || || ||||| || || | ||| Sbjct 5051853 TAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGG 5051794 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||||||| ||| || ||| ||| | | | || || ||||||| Sbjct 5051793 AATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCAATGGTATCCGAGGACTCCA 5051735 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || ||||| ||||| ||||| ||||||||| Sbjct 5051734 CCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCATG 5051685 Score = 147 bits (162), Expect = 2e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | ||||| || |||||| ||||||||| ||||| |||||| Sbjct 5110697 GCCACCGCGAAGACGGAGAACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGCT 5110756 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| |||| ||||||||||| || ||||| || || ||||| || || | ||| Sbjct 5110757 TAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCGGGGGG 5110816 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||||||| ||| || ||| ||| | | | || || ||||||| Sbjct 5110817 AATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCAATGGTATCCGAGGACTCCA 5110875 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || ||||| ||||| ||||| ||||||||| Sbjct 5110876 CCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCATG 5110925 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || |||||||| || ||||||||| ||||| ||||| || Sbjct 5110185 CCACCACGCAGACGAAGGACGAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAC 5110244 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || | ||||||||| || || || |||||||| ||||| | || Sbjct 5110245 AGGGTGCGGCCATCTTCCAACTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCGGGAGGG 5110304 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||||| || | | | ||||| ||||| || Sbjct 5110305 ATGCCCTCCTTGTCCTGGATCTTGCTCTTCA-CGTTGTCGATTGTGTCAGAAGACTCGAC 5110363 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| || || || || || || || ||||| ||||||||||||||| Sbjct 5110364 TTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTGACGAAAATCTGCATG 5110412 Score = 127 bits (140), Expect = 2e-24 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||||| || || ||| ||||||||| || || |||||||| Sbjct 5110412 GCCACCACGCAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGA 5110471 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||||||| | || || || |||||||||||||| ||||| ||||| ||||| | || Sbjct 5110472 GAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAAAATCAGACGCTGCTGGTCGGGAGG 5110531 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || ||| ||| | | | || ||| ||||| | Sbjct 5110532 GATACCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATGGTATCGGAAGACTCGA 5110590 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 |||| | || || || || || ||||| ||||| |||| Sbjct 5110591 CCTCGAGAGTGATGGTCTTTCCGGTCAGGGTCTTGACGA 5110629 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | || |||||||| || ||||||||| ||||| || || || Sbjct 5109956 GCCGCCACGAAGACGCAGGACGAGATGCAGAGTCGACTCCTTCTGGATGTTGTAATCCGA 5110015 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| || | || || |||||||| || ||||| ||||||||||| ||||| | || Sbjct 5110016 CAGGGTACGTCCATCTTCCAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGG 5110075 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || | |||||| ||| ||| || |||| ||| | | |||||| ||| || | Sbjct 5110076 AATACCCTCCTTATCCTGGATCTTCGACTTC-ACGTTATCGATCGTGTCGGACGATTCGA 5110134 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | |||| || || || || || || || ||||| || || |||||||| Sbjct 5110135 CTTCCAGGGTAATAGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 5110183 Score = 107 bits (118), Expect = 2e-18 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| || || ||||||||||||||||| | || || || |||||||||||||| Sbjct 5052162 CTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGTTGCTTGCCGGCGAA 5052103 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 ||||| ||||| ||||| | || | | |||||||||| ||| || ||| ||| Sbjct 5052102 AATCAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTT-GACGT 5052044 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | || ||| ||||| ||||| | || || || || || ||||| ||||| | Sbjct 5052043 TGTCGATGGTATCGGAAGACTCGACCTCGAGAGTGATGGTCTTTCCGGTCAGGGTCTTGA 5051984 Query 41850 CGA 41852 ||| Sbjct 5051983 CGA 5051981 >seq5 Length=5645814 Score = 136 bits (150), Expect = 4e-27 Identities = 148/193 (77%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||||||||||||||| | || || ||||||||||||||||| | Sbjct 3291299 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 3291358 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||||||||| ||||| | ||| | || |||||||||| ||| || ||| ||| | Sbjct 3291359 TCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTG 3291417 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | ||||| ||||||||||| | || || || || ||||| || ||||| ||| Sbjct 3291418 TCAATGGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTGCCCGTAAGGGTCTTCACG 3291477 Query 41852 AAAATCTGCATGT 41864 ||| ||| |||| Sbjct 3291478 AAA--CTGAATGT 3291488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303947990800