Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq5 120 6e-22
>seq5
Length=3886632
Score = 120 bits (132), Expect = 6e-22
Identities = 291/432 (67%), Gaps = 13/432 (3%)
Strand=Plus/Plus
Query 230203 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGT 230262
||||| |||||| | || ||| ||| | ||||||| ||||| ||| ||
Sbjct 155127 GTTGAGGGTATTTTCTTCAGCGGTGCTTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGC 155186
Query 230263 GTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAA 230322
| ||||||||||| | || |||||| ||||| || ||||||||||| ||
Sbjct 155187 CTCATGCCTGGCCTGACCTTCTCCAACGAGCTCATCTCGCGAGACGAGGGTCTGCACACT 155246
Query 230323 CAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAGACGGTCA-- 230380
| |||| | || || | || | || ||||| | ||| | | | |||||
Sbjct 155247 GACTTCGCCTGCCTGCTGCACTCCCACCTGAAGAACCG--TGCCAG-CAAAAAGGTCATT 155303
Query 230381 -AACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGT--GACGCTATTC 230437
| | ||||| || || || ||| | || ||||||| |||| || ||| | |
Sbjct 155304 GAGGATATCATCACCGACGCCGTTACCATTGAGCAGGAGTT--TTTGACCGAGGCTCTGC 155361
Query 230438 CATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCC 230496
| || ||| || | ||||||||||| || || ||| || ||||| || ||||| |||
Sbjct 155362 CCTG-CGCGCTGCTCGGCATGAACGCCGATCTGATGAAGCAATACATTGAGTTCGTTGCC 155420
Query 230497 GACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCA 230556
|||||| | | || || || || ||||||| || ||||| || ||||||||| |
Sbjct 155421 GACCGCCTGCTCGTGGCCCTGGGCAACGAGAAGGTTTACAAGTCGTCGAACCCCTTCGAC 155480
Query 230557 TTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGAC 230616
||||||||| ||| || || || ||||||||||||||||| ||||| || | |||
Sbjct 155481 TTTATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGCGAC 155540
Query 230617 TATCAG-AGGCC 230627
|| ||| |||||
Sbjct 155541 TACCAGAAGGCC 155552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823105477580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |