Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq4 178 2e-39 seq5 93.3 5e-14 >seq4 Length=4519820 Score = 178 bits (196), Expect = 2e-39 Identities = 460/699 (66%), Gaps = 14/699 (2%) Strand=Plus/Plus Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040 ||||| || || | || ||||| | | ||| || || | | || || || ||||| Sbjct 1715573 CCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCATTCTTCTCGACACGCTTCATG 1715632 Query 54041 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100 || ||||| || ||||| ||||| | || | || | || | | ||||| || || Sbjct 1715633 AAAAGATCGGGGATCCACAGAGCAAGGAACAAGTCACGGGCACGAACCTCCTCCTTGCCA 1715692 Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160 ||||| |||||||||||| | | | || | ||||| || |||| ||| ||| Sbjct 1715693 TGGTTCTTCCGCAGATCGAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCCAGGTAGATG 1715752 Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220 | | | | || || || ||||| || |||||||| | |||||| || ||||| || | Sbjct 1715753 GCAAAAGCGCCGGGTCGCTTGTTGCCACCCTGATCGACGTATCTGGCAGTGTTGTTGAAG 1715812 Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280 || | | ||| ||| | | ||| ||||| | || ||||| |||| || || || Sbjct 1715813 ACGCGAAGCATGGGAGTGACACCGTTGGAAGTGCCGTTGGTACCGGCAATGTAAGACCCG 1715872 Query 54281 CTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCG 54340 |||| |||||| || ||||| || || || ||||| || ||||| | || Sbjct 1715873 GTGGCGCGAATACGGTGAACGTTCAGACCGATGCCACCAGCCATCTTGGAGATCATGGCA 1715932 Query 54341 CATCGT-TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 54399 || ||| || | ||||||||||||||||| || || || ||| |||||| | || || Sbjct 1715933 CA-CGTCTTGAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACCAGGAA 1715991 Query 54400 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 54459 || |||| ||| || || || ||||| || | ||| || || ||||| || Sbjct 1715992 GCACGAGGACAACTGGGCTTGAGGGGTGCCTGCATTGAAAAGGGTGGGCGAGGCGTGGGT 1716051 Query 54460 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATAT------CCCA 54513 || | || || | || |||||||||||||| | || |||| |||| Sbjct 1716052 GAAGAACTTGCTGGACATGAGGTTGTACGTCTCGATGACACGCTCAATATTGTCTCCCCA 1716111 Query 54514 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 54573 | || || || ||||||||||| | |||||| || || | |||||||| ||| Sbjct 1716112 T------ATGCCAACAGCGACACGCATGATCATGTGTTGGGGACGCTCAACGATTTTGCC 1716165 Query 54574 GTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 54633 ||| | || |||| ||| ||| |||| || || || || || || | ||| || Sbjct 1716166 GTTGAGCTTGAGCAGGTATGATCGCTCCAGGGTCTTGAAGCCGAAGTACTGGTAGTTGAA 1716225 Query 54634 GTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTT 54672 ||| || ||||| | ||| | |||| || | |||||| Sbjct 1716226 GTCGCGGTCGTAGACAATGGCAGAGTCAAGCTCATCCTT 1716264 >seq5 Length=3886632 Score = 93.3 bits (102), Expect = 5e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || ||||| || ||| ||||||||||||| || | |||||||| || || || Sbjct 155257 CAGGCGAAGTCAGTGTGCAGACCCTCGTCTCGCGAGATGAGCTCGTTGGAGAAGGTCAGG 155198 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 || ||||| ||||||||||| || ||||| || ||||| ||||| | || |||||| Sbjct 155197 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAGAAA 155138 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAG 24283 || || || || || || |||||||| || Sbjct 155137 ATACCCTCAACGGCGGCGAAGGCAATCAG 155109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721110179680