Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq7 143 3e-29
seq3 113 5e-20
>seq7
Length=1956921
Score = 143 bits (158), Expect = 3e-29
Identities = 152/198 (77%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046
||||||||||| || |||||||| || |||||| || |||| || |||||||| |||
Sbjct 228852 GTGCTCTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCGTCCTCCAGCTGCTTGCCA 228793
Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTT 43105
|| || ||||| ||||||||||| | || | || |||||||||| ||| | || | ||
Sbjct 228792 GCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC-TGAATCTTCGACTT 228734
Query 43106 GAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 43165
|| | | | || |||||||||||||| || | |||||| || ||||| || | |||
Sbjct 228733 GACATTGTCGATGGTATCGCTCGATTCCACCTCCAACGTGATCGTCTTGCCGGTCAACGT 228674
Query 43166 CTTTACAAAGATTTGCAT 43183
||| |||||||| |||||
Sbjct 228673 CTTGACAAAGATCTGCAT 228656
Score = 91.5 bits (100), Expect = 2e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || |||||||| | ||||| || | || || |||||||| || |||||
Sbjct 228391 CTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAA 228332
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || ||||||||||||| ||| | || |||||||||| ||| || || | |
Sbjct 228331 GATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCGACTTAACATT 228272
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | || || || ||||| |||| |||||||| || || || || ||||| ||
Sbjct 228271 GTCGATAGTATCCGAGGACTCCACCTCGAGGGTGATGGTCTTTCCAGTAAGGGTCTTGAC 228212
Score = 86.0 bits (94), Expect = 7e-12
Identities = 122/169 (72%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| || || ||||| || | || ||||| | || || |||||||| || |||||
Sbjct 228098 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTCCGGCCATCTTCGAGCTGCTTGCCGGCGAA 228039
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
|| || ||||||||||| | ||| | || |||||||||| ||| | || | || |
Sbjct 228038 AATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC-TGAATCTTCGACTTCACAT 227980
Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159
| | | |||||| || || || |||| |||||||| ||||||||
Sbjct 227979 TGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCCGT 227931
>seq3
Length=4560853
Score = 113 bits (124), Expect = 5e-20
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028
|||| ||||| |||| ||||||||||| || || ||||| || ||| || || |
Sbjct 1026362 CGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 1026303
Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088
|| || |||||||| || ||||| || || ||||||||||| | || | || |||||||
Sbjct 1026302 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTG 1026243
Query 43089 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
||| ||| || |||| ||| | | | |||||| || ||||| || | |||||
Sbjct 1026242 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGAT 1026184
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186
|| || ||||| || ||||| || || || ||||| ||
Sbjct 1026183 CGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1026145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571817128250480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |