Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq7 149 4e-31 seq3 114 8e-21 seq2 98.7 6e-16 >seq7 Length=1956921 Score = 149 bits (164), Expect = 4e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||||||||| | || || ||||| | || || || ||||| || ||||||||| | Sbjct 228882 CCGCCGCGCAGGCGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAGTCGCTC 228823 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| |||| ||||||||| || || ||||| ||||||||||| ||| Sbjct 228822 AGAGTGCGACCGTCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGA 228763 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | |||| ||||||| || Sbjct 228762 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCGCTCGATTCCACC 228703 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||| || |||||||| | || || |||||||||||||| Sbjct 228702 TCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACAAAGATCTGCAT 228656 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | ||| ||||| || | ||| || ||||| |||||||||||| Sbjct 228654 CCACCGCGCAGGCGCAGAACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTG 228595 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||| || || || ||||| || ||||| ||| || Sbjct 228594 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGATCGGGAGGG 228535 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | ||| | ||||| || Sbjct 228534 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCACTGGATTCCACC 228475 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||| || || ||||| || || || || ||||||||||| Sbjct 228474 TCCAGCGTGATCGTCTTCCCGGTCAGCGTCTTGACGAAGATCTGCAT 228428 Score = 104 bits (114), Expect = 2e-17 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || || ||||| |||||||||||||| Sbjct 228133 CCACCGCGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 228074 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281 || ||| | || || | ||||||||| |||||||| || ||||||||||| | |||| Sbjct 228073 AGGGTCCGGCCATCTTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGCGGG 228014 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||| | || | | || | |||| || ||||| Sbjct 228013 -ATGCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTGTCGGAGGACTCGAC 227955 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGA 34367 || | |||||||| ||||| |||| Sbjct 227954 CTCGAGAGTGATGGTCTTGCCCGTGA 227929 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | ||| || ||||| | || || ||||| |||||||| ||||| Sbjct 228426 CCACCACGGAGACGCAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGAG 228367 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | |||||| || ||||| || || |||||||||||| || Sbjct 228366 AGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 228307 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | ||| | || || || Sbjct 228306 ATGCCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATAGTATCCGAGGACTCCACC 228247 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 || | |||||||| || || || || || || || Sbjct 228246 TCGAGGGTGATGGTCTTTCCAGTAAGGGTCTTGAC 228212 >seq3 Length=4560853 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | |||||||||||| | || || || ||||| |||||||||||| | Sbjct 1026374 CCACCACGGAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 1026315 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||||||| ||||| || || ||||||||||| ||| Sbjct 1026314 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 1026255 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | |||| || || || Sbjct 1026254 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1026195 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || || ||||| || || || || ||||||||| Sbjct 1026194 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATC 1026147 >seq2 Length=4704548 Score = 98.7 bits (108), Expect = 6e-16 Identities = 139/193 (72%), Gaps = 3/193 (2%) Strand=Plus/Minus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| ||||||||||||||||| ||| | || || | ||||||||| ||||| || Sbjct 2063068 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 2063009 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 | |||||||| || ||| | || ||||||||| ||||| ||| | || | | Sbjct 2063008 AATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2062949 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381 |||| || | || ||||| || | |||||||| ||||| || || || ||||| | Sbjct 2062948 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA-- 2062891 Query 34382 ATCTGCA-TCGCT 34393 | ||||| ||||| Sbjct 2062890 AACTGCATTCGCT 2062878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071740128960