Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq4 100 6e-16 seq1 98.7 2e-15 >seq4 Length=4519820 Score = 100 bits (110), Expect = 6e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 254000 CCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGC 254059 |||||| ||| |||| | |||| || || || || || |||||||| || ||||| || Sbjct 1535028 CCTTCCCCATCTGCTCCTGTACGGCCCGCCGGGCACGGGAAAGACGTCGACGATCCTCGC 1535087 Query 254060 GCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119 ||||||||| | | | || | | |||||| || || ||||| ||||| ||||| Sbjct 1535088 GCTGGCCCGCCGCATCTACGGTGCCGCCAACATGCGACAGATGGTGCTGGAGCTCAACGC 1535147 Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167 || ||||| || || | |||||||| ||||| |||||||||| || Sbjct 1535148 GTCCGACGACCGAGGCATCGACGTCGTTCGCGAGCAGATCAAGACGTT 1535195 >seq1 Length=5152962 Score = 98.7 bits (108), Expect = 2e-15 Identities = 259/391 (66%), Gaps = 26/391 (7%) Strand=Plus/Plus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| || | || || ||||| || |||||||| || ||||||||||| || || | Sbjct 3930546 TGCTCTTTTATGGCCCACCCGGTACGGGCAAGACATCTACCATCCTGGCTCTCGCGAAAG 3930605 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAG---CGCGTGCTCGAGCTGAACGCTTCTGACG 254127 |||| || | |||| |||| || |||||||| |||||||| || || |||| Sbjct 3930606 AGCTGTACGG--ACCGGAA-ATGATGAAGTCACGCGTGCTTGAGCTGAATGCGTCGGACG 3930662 Query 254128 AACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGA-CTTTC------TCCAAGATGTCG 254180 | || || | | ||||||| || ||| |||||| |||| | ||| || | Sbjct 3930663 AGCGTGGCATCTCCATCGTCCGAGAAAAGGTCAAGAACTTTGCACGTATGCAAT-TGACC 3930721 Query 254181 ATTTCGTCGT--TCC----------AACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTG 254228 | | || || ||| || | ||| |||||||||||| || | || || Sbjct 3930722 AATCCGCCGCCGTCCCTCAAGAATAAATACCCCTGCCCGCCTTTCAAGATCATTATTCTC 3930781 Query 254229 GACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACG 254288 ||||| || ||| |||||||| || || ||| ||| | || || || ||||| || Sbjct 3930782 GACGAAGCCGACTCCATGACGCAGGATGCTCAGAGTGCCTTGCGTCGCACCATGGAAACA 3930841 Query 254289 CACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCG 254348 || | | ||||| || || || | |||||||||||| | ||||||| ||| Sbjct 3930842 TACAGCAAGATCACGCGCTTCTGTTTGATCTGCAACTACGTGACCCGCATCATCGACCCT 3930901 Query 254349 CTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 || ||| ||| ||| |||||| || |||| Sbjct 3930902 CTCGCTAGTCGATGCAGCAAGTTCCGCTTCA 3930932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765491996288