Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq4 100 6e-16
seq1 98.7 2e-15
>seq4
Length=4519820
Score = 100 bits (110), Expect = 6e-16
Identities = 123/168 (73%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 254000 CCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGC 254059
|||||| ||| |||| | |||| || || || || || |||||||| || ||||| ||
Sbjct 1535028 CCTTCCCCATCTGCTCCTGTACGGCCCGCCGGGCACGGGAAAGACGTCGACGATCCTCGC 1535087
Query 254060 GCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119
||||||||| | | | || | | |||||| || || ||||| ||||| |||||
Sbjct 1535088 GCTGGCCCGCCGCATCTACGGTGCCGCCAACATGCGACAGATGGTGCTGGAGCTCAACGC 1535147
Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167
|| ||||| || || | |||||||| ||||| |||||||||| ||
Sbjct 1535148 GTCCGACGACCGAGGCATCGACGTCGTTCGCGAGCAGATCAAGACGTT 1535195
>seq1
Length=5152962
Score = 98.7 bits (108), Expect = 2e-15
Identities = 259/391 (66%), Gaps = 26/391 (7%)
Strand=Plus/Plus
Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070
|||| || | || || ||||| || |||||||| || ||||||||||| || || |
Sbjct 3930546 TGCTCTTTTATGGCCCACCCGGTACGGGCAAGACATCTACCATCCTGGCTCTCGCGAAAG 3930605
Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAG---CGCGTGCTCGAGCTGAACGCTTCTGACG 254127
|||| || | |||| |||| || |||||||| |||||||| || || ||||
Sbjct 3930606 AGCTGTACGG--ACCGGAA-ATGATGAAGTCACGCGTGCTTGAGCTGAATGCGTCGGACG 3930662
Query 254128 AACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGA-CTTTC------TCCAAGATGTCG 254180
| || || | | ||||||| || ||| |||||| |||| | ||| || |
Sbjct 3930663 AGCGTGGCATCTCCATCGTCCGAGAAAAGGTCAAGAACTTTGCACGTATGCAAT-TGACC 3930721
Query 254181 ATTTCGTCGT--TCC----------AACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTG 254228
| | || || ||| || | ||| |||||||||||| || | || ||
Sbjct 3930722 AATCCGCCGCCGTCCCTCAAGAATAAATACCCCTGCCCGCCTTTCAAGATCATTATTCTC 3930781
Query 254229 GACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACG 254288
||||| || ||| |||||||| || || ||| ||| | || || || ||||| ||
Sbjct 3930782 GACGAAGCCGACTCCATGACGCAGGATGCTCAGAGTGCCTTGCGTCGCACCATGGAAACA 3930841
Query 254289 CACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCG 254348
|| | | ||||| || || || | |||||||||||| | ||||||| |||
Sbjct 3930842 TACAGCAAGATCACGCGCTTCTGTTTGATCTGCAACTACGTGACCCGCATCATCGACCCT 3930901
Query 254349 CTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
|| ||| ||| ||| |||||| || ||||
Sbjct 3930902 CTCGCTAGTCGATGCAGCAAGTTCCGCTTCA 3930932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073765491996288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |