Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq7 120 3e-22
seq3 89.7 5e-13
>seq7
Length=1956921
Score = 120 bits (132), Expect = 3e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|||| ||| | || | |||||||| || || ||||| || ||||| | |||| |
Sbjct 228642 CGCAGAACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCG 228583
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
|| |||||||| || || ||| |||| |||||||||||||||||||| ||||| || |||
Sbjct 228582 TCCTCGAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGATCGGGAGGGATGCCCTCCTTG 228523
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| ||| || || | | || | || || ||| |||||||| | || | |
Sbjct 228522 TCCTGGATCTTCGACTTGACGTTGTCGATGGTATCACTGGATTCCACCTCCAGCGTGATC 228463
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||| ||||||| ||| || ||||| || ||||||
Sbjct 228462 GTCTTCCCGGTCAGCGTCTTGACGAAGATCTGCATA 228427
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|||||||| || | || | || | ||| | || ||| || || || || || |||
Sbjct 228885 TGGCCGCCGCGCAGGCGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAGTCG 228826
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
|||| |||| ||| || ||||| || |||||| |||| ||||| ||||| || ||
Sbjct 228825 CTCAGAGTGCGACCGTCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGG 228766
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTC 139713
|| ||||| || ||||| ||| | || | || | | || | || ||| | | ||
Sbjct 228765 GGAATGCCCTCCTTGTCC-TGAATCTTCGACTTGACATTGTCGATGGTATCGCTCGATTC 228707
Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||||| | || | |||||||||||||||||| || || || || ||||||
Sbjct 228706 CACCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACAAAGATCTGCATA 228655
>seq3
Length=4560853
Score = 89.7 bits (98), Expect = 5e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 139573 CTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATA 139632
||| || || ||||| || ||||||| |||| || |||||||| || || || |
Sbjct 1026339 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 1026280
Query 139633 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTG 139692
|||||| || ||||| || || || ||||| || ||||| ||| || || | |
Sbjct 1026279 GATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 1026220
Query 139693 TTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTAC 139752
|| | ||||||| | ||||||||||| ||| | |||||| || || | || || ||
Sbjct 1026219 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGAC 1026160
Query 139753 GAATATTTGCAT 139764
||| || |||||
Sbjct 1026159 GAAAATCTGCAT 1026148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063590747200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |