Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq7 120 3e-22 seq3 89.7 5e-13 >seq7 Length=1956921 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||| ||| | || | |||||||| || || ||||| || ||||| | |||| | Sbjct 228642 CGCAGAACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCG 228583 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || |||||||| || || ||| |||| |||||||||||||||||||| ||||| || ||| Sbjct 228582 TCCTCGAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGATCGGGAGGGATGCCCTCCTTG 228523 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | || || ||| |||||||| | || | | Sbjct 228522 TCCTGGATCTTCGACTTGACGTTGTCGATGGTATCACTGGATTCCACCTCCAGCGTGATC 228463 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| ||||||| ||| || ||||| || |||||| Sbjct 228462 GTCTTCCCGGTCAGCGTCTTGACGAAGATCTGCATA 228427 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 |||||||| || | || | || | ||| | || ||| || || || || || ||| Sbjct 228885 TGGCCGCCGCGCAGGCGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAGTCG 228826 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 |||| |||| ||| || ||||| || |||||| |||| ||||| ||||| || || Sbjct 228825 CTCAGAGTGCGACCGTCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGG 228766 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTC 139713 || ||||| || ||||| ||| | || | || | | || | || ||| | | || Sbjct 228765 GGAATGCCCTCCTTGTCC-TGAATCTTCGACTTGACATTGTCGATGGTATCGCTCGATTC 228707 Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||||| | || | |||||||||||||||||| || || || || |||||| Sbjct 228706 CACCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACAAAGATCTGCATA 228655 >seq3 Length=4560853 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 139573 CTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATA 139632 ||| || || ||||| || ||||||| |||| || |||||||| || || || | Sbjct 1026339 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 1026280 Query 139633 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTG 139692 |||||| || ||||| || || || ||||| || ||||| ||| || || | | Sbjct 1026279 GATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 1026220 Query 139693 TTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTAC 139752 || | ||||||| | ||||||||||| ||| | |||||| || || | || || || Sbjct 1026219 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGAC 1026160 Query 139753 GAATATTTGCAT 139764 ||| || ||||| Sbjct 1026159 GAAAATCTGCAT 1026148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063590747200