Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq4 196 7e-45 seq5 100 4e-16 >seq4 Length=4519820 Score = 196 bits (216), Expect = 7e-45 Identities = 464/699 (66%), Gaps = 14/699 (2%) Strand=Plus/Plus Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950 ||||| || |||| || ||||| | | ||| || |||| | || || || ||||| Sbjct 1715573 CCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCATTCTTCTCGACACGCTTCATG 1715632 Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010 || ||||| || ||||| ||||| | || | || | || | | |||||| || || Sbjct 1715633 AAAAGATCGGGGATCCACAGAGCAAGGAACAAGTCACGGGCACGAACCTCCTCCTTGCCA 1715692 Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070 ||||| |||||||||||| | | | || | ||||| || |||| ||| ||| Sbjct 1715693 TGGTTCTTCCGCAGATCGAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCCAGGTAGATG 1715752 Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130 || | | | || ||||| ||||| || |||||||| | |||||| || ||||| || | Sbjct 1715753 GCAAAAGCGCCGGGTCGCTTGTTGCCACCCTGATCGACGTATCTGGCAGTGTTGTTGAAG 1715812 Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190 || | | ||| ||| | | ||| ||||| || || ||||| |||| || || || Sbjct 1715813 ACGCGAAGCATGGGAGTGACACCGTTGGAAGTGCCGTTGGTACCGGCAATGTAAGACCCG 1715872 Query 80191 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 80250 |||| |||||| || ||||| || || || ||||| || ||||| | || Sbjct 1715873 GTGGCGCGAATACGGTGAACGTTCAGACCGATGCCACCAGCCATCTTGGAGATCATGGCA 1715932 Query 80251 CATCGT-TTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAA 80309 || ||| || | ||||||||||||||||| ||||| || || |||||| | || || Sbjct 1715933 CA-CGTCTTGAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACCAGGAA 1715991 Query 80310 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 80369 || |||| ||| || || || ||||| || | ||| || || ||||| || Sbjct 1715992 GCACGAGGACAACTGGGCTTGAGGGGTGCCTGCATTGAAAAGGGTGGGCGAGGCGTGGGT 1716051 Query 80370 AAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATAT------CCCA 80423 || | || |||| || ||||||||||| || | || |||| |||| Sbjct 1716052 GAAGAACTTGCTGGACATGAGGTTGTACGTCTCGATGACACGCTCAATATTGTCTCCCCA 1716111 Query 80424 TTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 80483 | || || || ||||||||||| | |||||| || || | |||||||| ||| Sbjct 1716112 T------ATGCCAACAGCGACACGCATGATCATGTGTTGGGGACGCTCAACGATTTTGCC 1716165 Query 80484 ATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 80543 || | || | || ||| ||| |||| || || || || || || | ||| || Sbjct 1716166 GTTGAGCTTGAGCAGGTATGATCGCTCCAGGGTCTTGAAGCCGAAGTACTGGTAGTTGAA 1716225 Query 80544 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 80582 ||| || ||||| | ||| | |||| || | |||||| Sbjct 1716226 GTCGCGGTCGTAGACAATGGCAGAGTCAAGCTCATCCTT 1716264 >seq5 Length=3886632 Score = 100 bits (110), Expect = 4e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| || ||||||||||||||||| || || |||||||| || || || Sbjct 155257 CAGGCGAAGTCAGTGTGCAGACCCTCGTCTCGCGAGATGAGCTCGTTGGAGAAGGTCAGG 155198 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| ||||||||||| || ||||| || ||||| ||||| | || ||||| Sbjct 155197 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAGAAA 155138 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAA 50104 || || || || ||||| ||||||| Sbjct 155137 ATACCCTCAACGGCGGCGAAGGCAA 155113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268207428240