Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq4 179 5e-40 seq5 86.0 8e-12 >seq4 Length=4519820 Score = 179 bits (198), Expect = 5e-40 Identities = 457/693 (66%), Gaps = 2/693 (0%) Strand=Plus/Plus Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033 ||||| || || || || ||||| | | ||| || |||| | | || || ||||| Sbjct 1715573 CCAGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCATTCTTCTCGACACGCTTCATG 1715632 Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093 || ||||| || ||||| ||||| | || | || | || | | |||||| || || Sbjct 1715633 AAAAGATCGGGGATCCACAGAGCAAGGAACAAGTCACGGGCACGAACCTCCTCCTTGCCA 1715692 Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153 ||||| |||||||||||| | | | || | ||||| || |||| ||| ||| Sbjct 1715693 TGGTTCTTCCGCAGATCGAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCCAGGTAGATG 1715752 Query 72154 GCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 72213 || | | | || || || ||||| || |||||||| | |||||| || ||||| || | Sbjct 1715753 GCAAAAGCGCCGGGTCGCTTGTTGCCACCCTGATCGACGTATCTGGCAGTGTTGTTGAAG 1715812 Query 72214 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 72273 || | | ||| ||| | | ||| ||||| | || ||||| |||| || || || Sbjct 1715813 ACGCGAAGCATGGGAGTGACACCGTTGGAAGTGCCGTTGGTACCGGCAATGTAAGACCCG 1715872 Query 72274 CTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 72333 |||| |||||| | || ||||| || || || ||||| || ||||| | || Sbjct 1715873 GTGGCGCGAATACGGTGAACGTTCAGACCGATGCCACCAGCCATCTTGGAGATCATGGCA 1715932 Query 72334 CATCGT-TTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 72392 || ||| || | ||||||||||||||||| || || || ||| |||||| | || || Sbjct 1715933 CA-CGTCTTGAGGGTATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACCAGGAA 1715991 Query 72393 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 72452 || |||| ||| || || || ||||| || | ||| || || ||||| || Sbjct 1715992 GCACGAGGACAACTGGGCTTGAGGGGTGCCTGCATTGAAAAGGGTGGGCGAGGCGTGGGT 1716051 Query 72453 AAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATG 72512 || | || |||| || ||||||||||| || | || |||| | Sbjct 1716052 GAAGAACTTGCTGGACATGAGGTTGTACGTCTCGATGACACGCTCAATATTGTCTCCCCA 1716111 Query 72513 TATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTAT 72572 ||| || || ||||||||||| | ||| || || || | |||||||| ||| || | Sbjct 1716112 TATGCCAACAGCGACACGCATGATCATGTGTTGGGGACGCTCAACGATTTTGCCGTTGAG 1716171 Query 72573 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 72632 || | || ||| ||| |||| || || || || || || | ||| ||||| || Sbjct 1716172 CTTGAGCAGGTATGATCGCTCCAGGGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCG 1716231 Query 72633 TTCGTAAATAATAACCGAATTGAGTTTATCCTT 72665 ||||| | ||| | || | || | |||||| Sbjct 1716232 GTCGTAGACAATGGCAGAGTCAAGCTCATCCTT 1716264 >seq5 Length=3886632 Score = 86.0 bits (94), Expect = 8e-12 Identities = 148/210 (70%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || ||||| || |||||||||||| |||| || | |||||||| || || || Sbjct 155257 CAGGCGAAGTCAGTGTGCAGACCCTCGTCTCGCGAGATGAGCTCGTTGGAGAAGGTCAGG 155198 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 || ||||| ||||||||||| || ||||| || || || ||||| | || ||||| Sbjct 155197 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAGAAA 155138 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA--AC-CGGCACTGTCATGT 42241 || || || || || || |||||||| || | || || | || | | |||| || Sbjct 155137 ATACCCTCAACGGCGGCGAAGGCAATCAGGCGCTGAGCAAAGGACGAGTCCTTGTCCTGA 155078 Query 42242 ATCCA-CTTTTGAGCCCAATCGGCCTTCTT 42270 ||||| | || ||||| ||||||||||| Sbjct 155077 ATCCATCGGATG-GCCCAGTCGGCCTTCTT 155049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138646310160