Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq4 233 3e-56 seq5 129 9e-25 >seq4 Length=4519820 Score = 233 bits (258), Expect = 3e-56 Identities = 352/495 (71%), Gaps = 4/495 (1%) Strand=Plus/Minus Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 ||||||| ||||| ||||| || || || |||||| | ||| ||||| |||| || | Sbjct 1715795 GATACGTCGATCAGGGTGGCAACAAGCGACCCGGCGCTTTTGCCATCTACCTGGAGCCCT 1715736 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 ||||||| ||||| ||||| || |||| |||| || ||| |||| || |||| | Sbjct 1715735 GGCACGCCGACGTCTTTGAGTTCCTCGATCTGCGGAAGAACCATGGCAAGGAGGAGGTTC 1715676 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044 | ||| | |||||||| ||| || ||| | || ||| | ||||||||||| ||| | Sbjct 1715675 GTGCCCGTGACTTGTTCCTTGCTCTGTGGATCCCCGATCTTTTCATGAAGCGTGTCGAGA 1715616 Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104 | |||| |||||| ||| ||||||||| || || || || ||| | ||||||| | Sbjct 1715615 AGAATGGCGACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGCCTGGCTGATTGCTACG 1715556 Query 97105 GCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGA-TACGTGAGACGA 97163 |||||||||| ||||| |||| | |||||| | ||||| | || |||| | Sbjct 1715555 GCGAAGAGTTCGAGGCTCTGTACGAGAAGTACGAGAAGCAGGGCAAAGGCCGCAAGACCA 1715496 Query 97164 GTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222 ||| || | |||| |||||| | ||||| || ||| ||| |||||||| | || Sbjct 1715495 TTCG-GGCGC-AGAAGCTGTGGTATTCCATCTTGGAGGCCCAGACGGAGACTGGCAACCC 1715438 Query 97223 GTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCAT 97282 || ||| |||||||||||| ||| || || || |||||||| || ||||||| || Sbjct 1715437 GTTCATGCTCTACAAGGATGCCGCCAACCGTAAGAGCAACCAGAAGAACCTGGGCACTAT 1715378 Query 97283 CAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGT 97342 | |||||||||||||||| || || | |||||| | | || || ||| ||| || Sbjct 1715377 CCGCAGCTCCAATCTGTGCACAGAGATCATCGAGTACTCTGCGCCTGATGAGGTGGCCGT 1715318 Query 97343 TTGCGTTCTGGCATC 97357 ||| ||||||| Sbjct 1715317 GTGCAACTTGGCATC 1715303 >seq5 Length=3886632 Score = 129 bits (142), Expect = 9e-25 Identities = 342/516 (66%), Gaps = 21/516 (4%) Strand=Plus/Plus Query 125346 GACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGAC 125405 ||||| || || | || || || ||||| | |||| || || ||||| | ||| | Sbjct 155028 GACACAGTCCCCTGCATTCGCAAGAAGGCCGACTGGGCCATCCGATGGATTCAGGACAAG 155087 Query 125406 AAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCG 125465 | || || | || | | ||| | || ||||||||||| ||||| || ||||| Sbjct 155088 GACTCGTCCTTTGCTCAGCGCCTGATTGCCTTCGCCGCCGTTGAGGGTATTTTCTTCAGC 155147 Query 125466 GGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCAC 125525 ||| |||||| ||||||| |||||||||||||| || |||||||| || ||||| | Sbjct 155148 GGTGCTTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTC 155207 Query 125526 AGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTT 125585 |||||| | || || ||||||||||| || ||| |||||| ||| | | ||| | Sbjct 155208 TCCAACGAGCTCATCTCGCGAGACGAGGGTCTGCACACTGACTTCGCC-TGC--CTGCTG 155264 Query 125586 CGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCAT---CAACATTGTA 125642 | | | | ||| || | | ||||| |||||||||| | || | Sbjct 155265 CACTCCCACCTG------AAGAACCGTGCCAGC---AAAAAGGTCATTGAGGATATCATC 155315 Query 125643 ACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATT 125702 ||||| ||||| | || || || |||||| | ||||| | || || | || | Sbjct 155316 ACCGACGCCGTTACCATTGAGCAGGAGTTTTTGACCGAGGCTCTGCCCTGCGCGCTGCTC 155375 Query 125703 GGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTAC 125762 ||||||||| | | || ||| | ||||| ||||| || || || || || || | Sbjct 155376 GGCATGAACGCCGATCTGATGAAGCAATACATTGAGTTCGTTGCCGACCGCCTGCT---C 155432 Query 125763 GAGTTGATTGGC--CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGC 125819 | | | ||| || ||| ||||||| | ||| ||||| || || ||| | | Sbjct 155433 GTGGCCCTGGGCAACGAGAAGGTTTACAAGTCGTCGAACCCCTTCGACTTTATGGAGAAC 155492 Query 125820 ATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 || || || | || ||||||||||| ||||||||| Sbjct 155493 ATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAG 155528 Score = 120 bits (132), Expect = 5e-22 Identities = 203/289 (70%), Gaps = 4/289 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| | || || || ||||| | |||||| | ||||| Sbjct 154646 ATCTGGCAAATGTACAAGAAGGCCGAAGCATCATTCTGGACCGCAGAAGAGATTGATCTC 154705 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || || ||| || |||| ||| | | || ||| || |||| | | || | || Sbjct 154706 TCAAAAGACTTGCACGACTGGAATAACCGCCTGAACGATGATGAGAGGTACTTCGTCTCT 154765 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||||| |||| ||||| || | ||| || || ||||||||||| || || || || || Sbjct 154766 CACATCCTGGCTTTCTTCGCGGCCTCGGACGGTATCGTCAACGAAAACCTCGTCGA-GCG 154824 Query 125198 ATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 |||| | |||| | || || |||| | ||||| || || ||||| ||||||| Sbjct 154825 ATTCAGCGGCGAAGTTCA-GATCCCCGAGGCGCGATGCTTCTATGGCTTCCAGATCATGA 154883 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 | |||||| | ||||| || | |||||| |||||||||| ||||| Sbjct 154884 TGGAGAACATCCACTCCGAGACATACTCTCTCCTGATTGACACCTACAT 154932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058588626160