Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq3 93.3 4e-14 seq7 91.5 1e-13 >seq3 Length=4560853 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582 || || ||||||||||| || |||||||| || || | || || | ||||| ||||| Sbjct 1026350 TGCAGGGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGGGTGCGGCCATCCTCGAGCTG 1026292 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| || | || | |||||||| ||| || | | ||||||||| || || Sbjct 1026291 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 1026232 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 ||||| | | || ||||| |||| ||||||| ||| | || || || || || Sbjct 1026231 GGACTTGACGTTGTCG--ATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCC 1026174 Query 48701 GTGAGAGTTTTCACAAAAATCTGCATCGTGTCT 48733 ||||| || || || |||||||||||| || || Sbjct 1026173 GTGAGGGTCTTGACGAAAATCTGCATCTTGCCT 1026141 >seq7 Length=1956921 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 || || ||||||||||| || || ||||| || || | || || ||||||||||||| Sbjct 228858 TGGAGGGTGCTCTCCTTCTGGATATTGTAGTCGCTCAGAGTG-CGACCGTCCTCCAGCTG 228800 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| || | | || | ||||||||| ||| || | | ||||||||| ||| || Sbjct 228799 CTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTT 228740 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 | ||||| | | ||||||||| | || ||| ||| | || || || || ||||| Sbjct 228739 CGACTTGACATTGTCGATGGTATCGCTCGATTCCACCTCCAACGTGATCGTCTTGCCGGT 228680 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 | || || ||||| |||||||| Sbjct 228679 CAACGTCTTGACAAAGATCTGCAT 228656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250861156066