Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq3 93.3 4e-14
seq7 91.5 1e-13
>seq3
Length=4560853
Score = 93.3 bits (102), Expect = 4e-14
Identities = 151/213 (71%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582
|| || ||||||||||| || |||||||| || || | || || | ||||| |||||
Sbjct 1026350 TGCAGGGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGGGTGCGGCCATCCTCGAGCTG 1026292
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| ||| || | || | |||||||| ||| || | | ||||||||| || ||
Sbjct 1026291 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 1026232
Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700
||||| | | || ||||| |||| ||||||| ||| | || || || || ||
Sbjct 1026231 GGACTTGACGTTGTCG--ATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCC 1026174
Query 48701 GTGAGAGTTTTCACAAAAATCTGCATCGTGTCT 48733
||||| || || || |||||||||||| || ||
Sbjct 1026173 GTGAGGGTCTTGACGAAAATCTGCATCTTGCCT 1026141
>seq7
Length=1956921
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582
|| || ||||||||||| || || ||||| || || | || || |||||||||||||
Sbjct 228858 TGGAGGGTGCTCTCCTTCTGGATATTGTAGTCGCTCAGAGTG-CGACCGTCCTCCAGCTG 228800
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| || | | || | ||||||||| ||| || | | ||||||||| ||| ||
Sbjct 228799 CTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTT 228740
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
| ||||| | | ||||||||| | || ||| ||| | || || || || |||||
Sbjct 228739 CGACTTGACATTGTCGATGGTATCGCTCGATTCCACCTCCAACGTGATCGTCTTGCCGGT 228680
Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726
| || || ||||| ||||||||
Sbjct 228679 CAACGTCTTGACAAAGATCTGCAT 228656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421250861156066
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |