Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq8 107 3e-19 seq5 95.1 2e-15 >seq8 Length=941819 Score = 107 bits (118), Expect = 3e-19 Identities = 86/101 (85%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||| || |||| ||| |||||| || |||||||| || ||||||||||| || || Sbjct 31966 GCTAAGCGCCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATCACCAAGCCTGCCAT 31908 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| ||||||||||| || ||||||||| |||||| Sbjct 31907 CCGACGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCTG 31867 Score = 89.7 bits (98), Expect = 8e-14 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| |||| ||| |||||| |||||| || || |||| ||| | Sbjct 31796 TGATCTACGAGGAGACCCGTGGTGTCCTGAAGACATTCCTCGAGGGTGTCATCCGTGACG 31737 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || || ||||||||||| || || ||||| ||||| ||| |||| ||||||| | Sbjct 31736 CCGTCACATACACCGAGCACGCCAAGCGGAAGACCGTCACGTCCCTGGACGTCGTCTACG 31677 Query 16656 CATTGAAACGTCAAGGCCG 16674 | |||| || |||||||| Sbjct 31676 CCCTGAAGCGACAAGGCCG 31658 >seq5 Length=3886632 Score = 95.1 bits (104), Expect = 2e-15 Identities = 83/101 (82%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||| | | ||||| |||||||| || ||||||||||| || || Sbjct 434997 GCCAAGCGTCACCGTAAGATTT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCCAT 434939 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| ||||| |||||||| ||||||||| | |||| Sbjct 434938 CCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATTTCTG 434898 Score = 89.7 bits (98), Expect = 8e-14 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| || | || ||||||| ||||||| || || |||| |||| Sbjct 434826 TGATCTACGAGGAGACCCGCGGCGTCTTGAAGACCTTCCTCGAGGGTGTCATCCGCGATG 434767 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || ||||| ||||| ||| | || ||||||| | Sbjct 434766 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACGTCCCTCGACGTCGTCTACG 434707 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | |||| || || ||||| | | || ||||| || ||||| Sbjct 434706 CCCTGAAGCGCCAGGGCCGCACCCTCTACGGTTTCGGTGGTTAA 434663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075139655738