Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq8 107 3e-19
seq5 95.1 2e-15
>seq8
Length=941819
Score = 107 bits (118), Expect = 3e-19
Identities = 86/101 (85%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|||||||| || |||| ||| |||||| || |||||||| || ||||||||||| || ||
Sbjct 31966 GCTAAGCGCCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATCACCAAGCCTGCCAT 31908
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| ||||||||||| || ||||||||| ||||||
Sbjct 31907 CCGACGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCTG 31867
Score = 89.7 bits (98), Expect = 8e-14
Identities = 103/139 (74%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| |||| ||| |||||| |||||| || || |||| ||| |
Sbjct 31796 TGATCTACGAGGAGACCCGTGGTGTCCTGAAGACATTCCTCGAGGGTGTCATCCGTGACG 31737
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || || ||||||||||| || || ||||| ||||| ||| |||| ||||||| |
Sbjct 31736 CCGTCACATACACCGAGCACGCCAAGCGGAAGACCGTCACGTCCCTGGACGTCGTCTACG 31677
Query 16656 CATTGAAACGTCAAGGCCG 16674
| |||| || ||||||||
Sbjct 31676 CCCTGAAGCGACAAGGCCG 31658
>seq5
Length=3886632
Score = 95.1 bits (104), Expect = 2e-15
Identities = 83/101 (82%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | ||| | | ||||| |||||||| || ||||||||||| || ||
Sbjct 434997 GCCAAGCGTCACCGTAAGATTT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCCAT 434939
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| ||||| |||||||| ||||||||| | ||||
Sbjct 434938 CCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATTTCTG 434898
Score = 89.7 bits (98), Expect = 8e-14
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| || | || ||||||| ||||||| || || |||| ||||
Sbjct 434826 TGATCTACGAGGAGACCCGCGGCGTCTTGAAGACCTTCCTCGAGGGTGTCATCCGCGATG 434767
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||| ||||| ||| | || ||||||| |
Sbjct 434766 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACGTCCCTCGACGTCGTCTACG 434707
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| |||| || || ||||| | | || ||||| || |||||
Sbjct 434706 CCCTGAAGCGCCAGGGCCGCACCCTCTACGGTTTCGGTGGTTAA 434663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075139655738
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |