Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq5 98.7 7e-16 seq7 82.4 5e-11 >seq5 Length=3886632 Score = 98.7 bits (108), Expect = 7e-16 Identities = 200/295 (68%), Gaps = 4/295 (1%) Strand=Plus/Minus Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCG--CCAAGGTCGAGGGTAAGGGAA 6252 ||||| ||||| |||||||| ||| ||| ||||| ||||| ||||||| ||||| | Sbjct 209938 GACGCCTTCTATCGCTACAAGATGGAGCG--TCTGCAGACCAAGATCGAGGGCAAGGGCA 209881 Query 6253 ACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTG 6312 ||||||| || ||||| ||||||| | || ||||| | || | || ||| Sbjct 209880 ACGGTATCAAGACCGTTGTTGTCAATCTTCCCAGCGTCGCCGCTTCTCTTGCGCGTCCTC 209821 Query 6313 CCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACA 6372 | | || | | || |||||||| | |||||| ||||| ||| | || | || Sbjct 209820 CTTCGTATCTCAACAAGTATTTCGGCTTCGAACTCGGCGCCATGACCAACAACGACCCCA 209761 Query 6373 AAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTG 6432 | |||| || | ||| | ||||| | || | | ||||| || |||||| || | Sbjct 209760 AGGACGATCGTTGGATCATCAACGGCGCCCACGAAGCCGCCAAACTTCAGGACCATCTGG 209701 Query 6433 ACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 | ||||| || |||||||||||| || | | ||| | ||||| ||||| || Sbjct 209700 ATGGCTTCATCAACAAGTTTGTGCTTTGCAAGAAGTGCAAGAACCCCGAGACGGA 209646 >seq7 Length=1956921 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 || || ||||||||||| || |||||||| || || | || |||| || | || Sbjct 228858 TGGAGGGTGCTCTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCGTCCTCCAGCTGC 228799 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || || ||||| || || || || || || | ||| | ||| || |||||| ||| || Sbjct 228798 TTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTC 228739 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 ||| ||||| | || ||||| | ||| || || || || || || || || ||| Sbjct 228738 GACTTGACATTGTCGATGGTATCGCTCGATTCCACCTCCAACGTGATCGTCTTGCCGGTC 228679 Query 38295 AAGGTTTTCACGAATATCTGCAT 38317 || || || || || |||||||| Sbjct 228678 AACGTCTTGACAAAGATCTGCAT 228656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946930576846