Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq5 98.7 7e-16
seq7 82.4 5e-11
>seq5
Length=3886632
Score = 98.7 bits (108), Expect = 7e-16
Identities = 200/295 (68%), Gaps = 4/295 (1%)
Strand=Plus/Minus
Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCG--CCAAGGTCGAGGGTAAGGGAA 6252
||||| ||||| |||||||| ||| ||| ||||| ||||| ||||||| ||||| |
Sbjct 209938 GACGCCTTCTATCGCTACAAGATGGAGCG--TCTGCAGACCAAGATCGAGGGCAAGGGCA 209881
Query 6253 ACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTG 6312
||||||| || ||||| ||||||| | || ||||| | || | || |||
Sbjct 209880 ACGGTATCAAGACCGTTGTTGTCAATCTTCCCAGCGTCGCCGCTTCTCTTGCGCGTCCTC 209821
Query 6313 CCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACA 6372
| | || | | || |||||||| | |||||| ||||| ||| | || | ||
Sbjct 209820 CTTCGTATCTCAACAAGTATTTCGGCTTCGAACTCGGCGCCATGACCAACAACGACCCCA 209761
Query 6373 AAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTG 6432
| |||| || | ||| | ||||| | || | | ||||| || |||||| || |
Sbjct 209760 AGGACGATCGTTGGATCATCAACGGCGCCCACGAAGCCGCCAAACTTCAGGACCATCTGG 209701
Query 6433 ACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
| ||||| || |||||||||||| || | | ||| | ||||| ||||| ||
Sbjct 209700 ATGGCTTCATCAACAAGTTTGTGCTTTGCAAGAAGTGCAAGAACCCCGAGACGGA 209646
>seq7
Length=1956921
Score = 82.4 bits (90), Expect = 5e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174
|| || ||||||||||| || |||||||| || || | || |||| || | ||
Sbjct 228858 TGGAGGGTGCTCTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCGTCCTCCAGCTGC 228799
Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234
|| || ||||| || || || || || || | ||| | ||| || |||||| ||| ||
Sbjct 228798 TTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTC 228739
Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294
||| ||||| | || ||||| | ||| || || || || || || || || |||
Sbjct 228738 GACTTGACATTGTCGATGGTATCGCTCGATTCCACCTCCAACGTGATCGTCTTGCCGGTC 228679
Query 38295 AAGGTTTTCACGAATATCTGCAT 38317
|| || || || || ||||||||
Sbjct 228678 AACGTCTTGACAAAGATCTGCAT 228656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946930576846
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |