Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq7 145 6e-30
seq3 107 2e-18
seq2 86.0 5e-12
>seq7
Length=1956921
Score = 145 bits (160), Expect = 6e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || ||| |||| || || |||||| |||
Sbjct 228428 ATGCAGATCTTCGTCAAGACGCTGACCGGGAAGACGATCACGCTGGAGGTGGAATCCAGT 228487
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | |||| || || || ||||||||||| || || ||||||||
Sbjct 228488 GATACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGATCAG 228547
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || |||||||| || ||| | ||||| ||||||| || ||| ||||||
Sbjct 228548 CAACGTCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCAGCGACTACAAC 228607
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || ||| | ||| | ||| |||| ||||||| |||
Sbjct 228608 ATCCAGAAGGAGTCTACCCTGCATCTGGTTCTGCGCCTGCGCGGTGGT 228655
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || || ||||| || ||| |||| | || |||||| | | |
Sbjct 228656 ATGCAGATCTTTGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGAGC 228715
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| || |||| || ||||| ||||||||||| ||||| || || ||
Sbjct 228716 GATACCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 228775
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||| ||||| ||| | ||||| ||||| | ||| |||||
Sbjct 228776 CAGCGTCTCATCTTTGCTGGCAAGCAGCTGGAGGACGGTCGCACTCTGAGCGACTACAAT 228835
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || |||| | || | || | || ||||||| ||
Sbjct 228836 ATCCAGAAGGAGAGCACCCTCCACCTCGTCCTCCGCCTGCGCGGCGG 228882
Score = 102 bits (112), Expect = 7e-17
Identities = 127/174 (73%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || ||||||| || || || || |||| ||| | ||| || | ||
Sbjct 227931 ACGGGCAAGACCATCACTCTCGAGGTCGAGTCCTCCGACACCATCGACAATGTGAAGTCG 227990
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| ||||| ||||||||||| || || || || || || || || || || ||||||||
Sbjct 227991 AAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCCTGATTTTCGCCGGCAAG 228050
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| | || ||| ||| ||| ||||||| |||||||| || || || ||||||
Sbjct 228051 CAGCTCGAAGATGGCCGGACCCTCTCCGACTACAACATCCAGAAGGAGTCCACC 228104
Score = 91.5 bits (100), Expect = 1e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| || || ||||| || | ||||| | ||| || | ||
Sbjct 228224 ACTGGAAAGACCATCACCCTCGAGGTGGAGTCCTCGGATACTATCGACAATGTTAAGTCG 228283
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| || || ||||| || || || || || || ||||| ||
Sbjct 228284 AAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTGATCTTCGCCGGAAAG 228343
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | || ||| |||||| |||||||||||||||| || || || || ||
Sbjct 228344 CAGCTCGAAGATGGCCGCACTCTCTCCGATTACAACATCCAGAAGGAGTCGAC 228396
>seq3
Length=4560853
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| ||||| || || || | || || || ||| |||| ||||| ||||| |
Sbjct 1026145 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 1026204
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| ||| | ||| | |||| || || || ||||||||||| || || || ||
Sbjct 1026205 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGAC 1026264
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || || || || || |||||||| ||| | |||||| ||||||| | ||| |||
Sbjct 1026265 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 1026324
Query 22396 AACATTCAAAAAGA 22409
||||| || || ||
Sbjct 1026325 AACATCCAGAAGGA 1026338
>seq2
Length=4704548
Score = 86.0 bits (94), Expect = 5e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || || || || |||| ||||| || || || | || || |
Sbjct 2062889 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 2062948
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || |||| || || || ||||||||||| || || || ||||| || || |
Sbjct 2062949 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGATT 2063008
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| || |||||||| ||| | |||||| ||| ||| | ||||| |||||||| || ||
Sbjct 2063009 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTGTCCGACTACAACATCCAGAA 2063068
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727662381290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |