Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq7 145 6e-30 seq3 107 2e-18 seq2 86.0 5e-12 >seq7 Length=1956921 Score = 145 bits (160), Expect = 6e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || ||| |||| || || |||||| ||| Sbjct 228428 ATGCAGATCTTCGTCAAGACGCTGACCGGGAAGACGATCACGCTGGAGGTGGAATCCAGT 228487 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || || || ||||||||||| || || |||||||| Sbjct 228488 GATACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGATCAG 228547 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || |||||||| || ||| | ||||| ||||||| || ||| |||||| Sbjct 228548 CAACGTCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCAGCGACTACAAC 228607 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || ||| | ||| | ||| |||| ||||||| ||| Sbjct 228608 ATCCAGAAGGAGTCTACCCTGCATCTGGTTCTGCGCCTGCGCGGTGGT 228655 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || ||||| || ||| |||| | || |||||| | | | Sbjct 228656 ATGCAGATCTTTGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGAGC 228715 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || |||| || ||||| ||||||||||| ||||| || || || Sbjct 228716 GATACCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 228775 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | ||||| ||||| | ||| ||||| Sbjct 228776 CAGCGTCTCATCTTTGCTGGCAAGCAGCTGGAGGACGGTCGCACTCTGAGCGACTACAAT 228835 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || |||| | || | || | || ||||||| || Sbjct 228836 ATCCAGAAGGAGAGCACCCTCCACCTCGTCCTCCGCCTGCGCGGCGG 228882 Score = 102 bits (112), Expect = 7e-17 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || ||||||| || || || || |||| ||| | ||| || | || Sbjct 227931 ACGGGCAAGACCATCACTCTCGAGGTCGAGTCCTCCGACACCATCGACAATGTGAAGTCG 227990 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| || || || || || || || || || || |||||||| Sbjct 227991 AAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCCTGATTTTCGCCGGCAAG 228050 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | || ||| ||| ||| ||||||| |||||||| || || || |||||| Sbjct 228051 CAGCTCGAAGATGGCCGGACCCTCTCCGACTACAACATCCAGAAGGAGTCCACC 228104 Score = 91.5 bits (100), Expect = 1e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || || ||||| || | ||||| | ||| || | || Sbjct 228224 ACTGGAAAGACCATCACCCTCGAGGTGGAGTCCTCGGATACTATCGACAATGTTAAGTCG 228283 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || ||||| || || || || || || ||||| || Sbjct 228284 AAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTGATCTTCGCCGGAAAG 228343 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | || ||| |||||| |||||||||||||||| || || || || || Sbjct 228344 CAGCTCGAAGATGGCCGCACTCTCTCCGATTACAACATCCAGAAGGAGTCGAC 228396 >seq3 Length=4560853 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || || || | || || || ||| |||| ||||| ||||| | Sbjct 1026145 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 1026204 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| ||| | ||| | |||| || || || ||||||||||| || || || || Sbjct 1026205 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGAC 1026264 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || || || || || |||||||| ||| | |||||| ||||||| | ||| ||| Sbjct 1026265 CAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 1026324 Query 22396 AACATTCAAAAAGA 22409 ||||| || || || Sbjct 1026325 AACATCCAGAAGGA 1026338 >seq2 Length=4704548 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || || || || |||| ||||| || || || | || || | Sbjct 2062889 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 2062948 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| || || || ||||||||||| || || || ||||| || || | Sbjct 2062949 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGATT 2063008 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || |||||||| ||| | |||||| ||| ||| | ||||| |||||||| || || Sbjct 2063009 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTGTCCGACTACAACATCCAGAA 2063068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727662381290