Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq6 131 3e-25 seq5 116 8e-21 seq3 86.0 1e-11 >seq6 Length=2732441 Score = 131 bits (144), Expect = 3e-25 Identities = 464/710 (65%), Gaps = 49/710 (7%) Strand=Plus/Plus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 || || ||||||||||||||||||||||| || || ||| | | | | ||||| Sbjct 1221013 CTCTCCGGTGGTTGGAAGATGAAGCTGGCTCTGTGCCGTGCCGTCTTCGAGGCTCCCGAT 1221072 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824 |||| ||||| || ||||| ||||||||| |||| || ||||| ||||| | | Sbjct 1221073 ATCCTGCTGCTCGACGAGCCCACCAACCACTTGGATGTCAAGAACGTCAAGTGGCTGGAG 1221132 Query 279825 TCCTACCTAACCAGT-----CTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTG 279879 ||||| |||| ||| | | ||| |||| |||||||||||||| Sbjct 1221133 GAGTACCTCACCAACTCCCCCTGCA--------CCTCCATCATCGTCTCTCACGACTCCA 1221184 Query 279880 GCTTCCTAGATGCCGTGTGCTCTGC-CATCATTCACTATGAGCAAAATCTGAAGCTCTCC 279938 ||||||| || ||| ||| | || ||| | ||||| |||| | |||||| Sbjct 1221185 GCTTCCTTGACAACGTCTGC-CAGCACATTGTCCACTACGAGCGCT---TCAAGCTC--- 1221237 Query 279939 AAGCACATC---GGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCG---CC 279992 |||| | | || |||||| ||| ||||| |||||| | ||||| || Sbjct 1221238 AAGCGCTACCGTGGTAACCTGGCTGAGTTCGTC---AAGCGCGTTCCCTCGGCCAAGTCC 1221294 Query 279993 TACTATGACCTGAAGGACGCCACCGCCA---AGTGGGAATTCCCTGAGCCAGGGTTTCTG 280049 ||||| || || | ||| ||| | ||| ||||| ||||| || || || Sbjct 1221295 TACTACGAGCTC---GGTGCCTCCGAGATGGAGTTCACCTTCCCCGAGCCCGGTTTCCTT 1221351 Query 280050 GAGGGCATCACATCAAAGGATCGCGCAATCATGAA-GCTCCGTGGCGTCTCCTTTGCTTA 280108 ||||| ||| | |||| || ||| || ||| | | | ||||| || Sbjct 1221352 GAGGGTGTCAAGACCAAGGCCAAGGCCATCCTGCGTGCTACCAAGA-TGTCCTTCCAGTA 1221410 Query 280109 TCCCAATGGCCCCAACAT-CTTCAG---CAGTG--TCAACTCGCAGGTTTCTATGAACTC 280162 ||| ||| || || | |||| ||| ||| || ||| ||| | ||| Sbjct 1221411 CCCC---GGCACCTCCAAGCCTCAGATCCAGGACATCACCTTCCAGTGCTCTCTCGGCTC 1221467 Query 280163 ACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGAC 280222 || |||| |||||||| ||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 1221468 TCGTATTGCCGTCATTGGCCCCAACGGTGCTGGCAAGTCGACCCTGATCAACGTCCTGAC 1221527 Query 280223 TGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTA 280282 || ||| | |||| ||||| | | |||| ||||| || || || || Sbjct 1221528 CGGTGAGCTCATCCCCACCGAGGGTGAGATCTACCAGCACGAGAACATTCGTATCGCCTA 1221587 Query 280283 CGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATA 280342 | || |||||||||||| ||||||||| ||||||||||||| |||||| | | || Sbjct 1221588 CATCAAGCAGCACGCTTTCGCCCACATCGACAACCACCTGGACAGCACTCCTTCCGAGTA 1221647 Query 280343 CATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCGC 280391 |||||||||||| | | || | ||| |||||| ||| | |||| ||| Sbjct 1221648 CATTCAGTGGCG-TTTCCAGACTGGTGAGGATCGCGAGACCATGGACCGC 1221696 Score = 107 bits (118), Expect = 4e-18 Identities = 126/168 (75%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 |||| | ||||||||| ||||| | ||||||| ||||| |||||||| ||||| | Sbjct 1222022 CCAACTTCGGTCTGGACGCCGAGCTGGTCTCTCACTCGCGCATGCGCGGTCTGTCTGGTG 1222081 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790 ||||| ||||| |||| | | || |||| |||||| | |||||| | ||||| Sbjct 1222082 GCCAGCGTGTCAAGACTGTCCTGGCTGCTTGCTC-GTGGCAGCGCCCTCATCTTATCGTC 1222140 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838 || ||||||||||||||||| || ||||| || |||||| || ||| Sbjct 1222141 CTTGACGAGCCTACCAACTACCTCGACCGTGACTCCCTGGGTGCCCTG 1222188 Score = 95.1 bits (104), Expect = 2e-14 Identities = 158/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 || |||||||| || |||| ||||| || || || |||| ||||| ||||| ||| Sbjct 1220650 GGCGAGGATCTCTGCAACTGCACCTTCTCTCTTGCCTACGGTGCCAAGATCCTGCTCAAC 1220709 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | ||| ||||||| ||| | || || ||||| ||| ||||| || | Sbjct 1220710 CAGACTCACCTGCGTCTCAAGCGCGGCCAGCGCTACGGTCTTTGCGGCCCCAACGGCTCT 1220769 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| |||||| ||||||||||| |||| ||| | || || || || || ||| Sbjct 1220770 GGCAAGTCCACTCTGATGCGCGCCATCAACAACGAGCAGGTCGAGGGCTTCCCCAA-GCA 1220828 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCT 279569 ||||| | ||| |||| || ||||||||| |||||||| || Sbjct 1220829 GAGCGAGGTCAAGACCGTGTTCGTCGAGCACGACCTCGACTCCGCT 1220874 >seq5 Length=3886632 Score = 116 bits (128), Expect = 8e-21 Identities = 295/444 (66%), Gaps = 10/444 (2%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| |||||| |||||||||||||| | Sbjct 155524 TCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCATAAAGTCGAAGGGGTTCGAC 155465 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | ||||| ||| | ||| || || |||| | |||||| || || ||||| | Sbjct 155464 GACTTGTAAACCTTCTCGTTGCCCAGGGCCACGAGCAGGCGGTCGGCAACGAACTCAATG 155405 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 || || |||||| || | ||||||||| | || || || | ||||| | Sbjct 155404 TATTGCTTCATCAGATCGGCGTTCATGCCGAGCAGCGCGCAGGGCAGAGCCTCGGTCAAA 155345 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTGTGC-CAGAGA 251798 || |||| || ||| ||| || || | || ||| | |||| | | | | Sbjct 155344 AACTCCTGCTCAATGGTAACGGCGTCGGTGATGATATCCTCAATGACCTTTTTGCTGGCA 155285 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858 | | |||| ||| | |||| ||| || | | || | ||||||||||||||| Sbjct 155284 CGG----TTCTTCAGGTGGGAGTGCAGCAGGCAGGCGAAGTCAGTGTGCAGACCCTCGTC 155229 Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918 || ||||| ||||||||| | |||||||||||| | ||||| ||| ||||||| Sbjct 155228 TCGCGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGGCCACGCTTCTTGAGCCA 155169 Query 251919 GAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAA 251977 |||||| | ||||||| | || ||| | | |||||| || | | |||| | Sbjct 155168 GAAGATGGAGGCAAAAGCA-CCGCTGAAGAAAATACCCTCAACGGCGGCGAAGGCAATCA 155110 Query 251978 GGCGCTCAGCAAACGACTTGTCCT 252001 |||||| |||||| ||| ||||| Sbjct 155109 GGCGCTGAGCAAAGGACGAGTCCT 155086 >seq3 Length=4560853 Score = 86.0 bits (94), Expect = 1e-11 Identities = 132/186 (71%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 280176 ATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAG 280235 || |||||||| ||||| || ||||| || || ||||| | || ||||||||||| | Sbjct 2939447 ATCGGACCCAACGGTGCTGGAAAGTCGACGCTCATCAAGCTTCTCACTGGCGAGACG-AT 2939389 Query 280236 GCCACTGAGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCA 280294 || || || | | | |||||| |||||| |||| || | ||| || ||||| Sbjct 2939388 TCCTTCGACCGGCAAGGTCGAGAAGCACCCCAACCTGCGAATCGGCTACATCAAGCAGCA 2939329 Query 280295 CGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCG 280354 ||| | | ||| | |||| || ||||| | ||| || ||||| ||| | |||||||| Sbjct 2939328 CGCGCTGGAGCACGTTGAGATGCATCTGGAGAAGACCCCCAACCAGTACCTGCAGTGGCG 2939269 Query 280355 CTATGC 280360 ||| || Sbjct 2939268 CTACGC 2939263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835930835506