Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq7 158 3e-33 seq3 125 2e-23 seq5 113 1e-19 >seq7 Length=1956921 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || || ||||| | || || || ||||| || |||||| | Sbjct 228654 CCACCGCGCAGGCGCAGAACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTG 228595 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || ||||| || ||||| ||||| || ||| ||| Sbjct 228594 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGATCGGGAGGG 228535 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || ||||| || || | ||| || ||||| || Sbjct 228534 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCACTGGATTCCACC 228475 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 228474 TCCAGCGTGATCGTCTTCCCGGTCAGCGTCTTGACGAAGATCTGCAT 228428 Score = 141 bits (156), Expect = 2e-28 Identities = 172/233 (74%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || || ||||| || | || ||||| || | ||||| || || |||||||| |||||| Sbjct 228885 TGGCCGCCGCGCAGGCGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAGTCG 228826 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || ||||| ||||| || | || || || || ||||| |||||||| || || Sbjct 228825 CTCAGAGTGCGACCGTCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGG---TCC 228769 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||| || || || || ||||| || |||| || || || || || | |||||||||| Sbjct 228768 GGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTATCGCTCGAT 228709 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | |||||||||||| ||||||| |||||||| || |||||||| Sbjct 228708 TCCACCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACAAAGATCTGCAT 228656 Score = 116 bits (128), Expect = 9e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| || || ||||| || || |||| | Sbjct 228426 CCACCACGGAGACGCAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGAG 228367 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | || ||||| ||||||||||| ||||| || ||| Sbjct 228366 AGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 228307 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || || || || |||| ||| || || || Sbjct 228306 ATGCCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATAGTATCCGAGGACTCCACC 228247 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 ||||| ||||| ||||| || || || |||||||||| Sbjct 228246 TCGAGGGTGATGGTCTTTCCAGTAAGGGTCTTGACGA 228210 Score = 105 bits (116), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||||||||| | || ||||| |||| ||| || || ||||| || |||| Sbjct 228137 CATG-CCACCGCGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGT 228079 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| ||| || || || ||||| | || || || ||||| ||||| ||||| || | Sbjct 228078 CGGAGAGGGTCCGGCCATCTTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAG 228019 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || ||||| || |||| ||||| || || || | ||| || | Sbjct 228018 GCGGGATGCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTGTCGGAGGACT 227959 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGT 288449 | || ||||| ||||| ||||| || || Sbjct 227958 CGACCTCGAGAGTGATGGTCTTGCCCGT 227931 >seq3 Length=4560853 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||||| || || ||||| || |||||| Sbjct 1026374 CCACCACGGAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 1026315 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || ||||||||||| ||||| || ||| Sbjct 1026314 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 1026255 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | ||| || || || Sbjct 1026254 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1026195 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||||||||||||| || || ||||||||||| |||||||| Sbjct 1026194 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 1026148 >seq5 Length=3886632 Score = 113 bits (124), Expect = 1e-19 Identities = 130/175 (74%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 269150 TGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCT 269209 || |||| ||||| |||||||| ||||| ||||| || || ||||| || || || | Sbjct 155371 TGCTCGGCATGAACGCCGATCTGATGAAGCAATACATTGAGTTCGTTGCCGACCGCCTGC 155430 Query 269210 TCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAAC 269269 || ||| || || | ||||| || ||||| ||| ||| ||||||| ||||||||| Sbjct 155431 TCGTGGCCCTGGGCAACGAGAAGGTTTACAAGTCGTCGAACCCCTTCGACTTTATGGAGA 155490 Query 269270 TAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324 || || || | || ||||| ||||||||||| ||||| || ||||||| || Sbjct 155491 ACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGCGACTACCA 155545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653402454748