Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq7 143 3e-29 seq3 113 5e-20 >seq7 Length=1956921 Score = 143 bits (158), Expect = 3e-29 Identities = 152/198 (77%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071 ||||||||||| || |||||||| || |||||| || |||| || |||||||| ||| Sbjct 228852 GTGCTCTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCGTCCTCCAGCTGCTTGCCA 228793 Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTT 42130 || || ||||| ||||||||||| | || | || |||||||||| ||| | || | || Sbjct 228792 GCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC-TGAATCTTCGACTT 228734 Query 42131 GAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 42190 || | | | || |||||||||||||| || | |||||| || ||||| || | ||| Sbjct 228733 GACATTGTCGATGGTATCGCTCGATTCCACCTCCAACGTGATCGTCTTGCCGGTCAACGT 228674 Query 42191 CTTTACAAAGATTTGCAT 42208 ||| |||||||| ||||| Sbjct 228673 CTTGACAAAGATCTGCAT 228656 Score = 86.0 bits (94), Expect = 7e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||| | ||||| || | || || |||||||| || ||||| Sbjct 228391 CTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAA 228332 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||||| || | || |||||||||| ||| || || | | Sbjct 228331 GATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCGACTTAACATT 228272 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | || || || ||||| |||| |||||||| || || || || ||||| || Sbjct 228271 GTCGATAGTATCCGAGGACTCCACCTCGAGGGTGATGGTCTTTCCAGTAAGGGTCTTGAC 228212 Score = 82.4 bits (90), Expect = 8e-11 Identities = 121/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | || ||||| | || || |||||||| || ||||| Sbjct 228098 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTCCGGCCATCTTCGAGCTGCTTGCCGGCGAA 228039 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || ||||||||||| | || | || |||||||||| ||| | || | || | Sbjct 228038 AATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC-TGAATCTTCGACTTCACAT 227980 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184 | | | |||||| || || || |||| |||||||| |||||||| Sbjct 227979 TGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCCGT 227931 >seq3 Length=4560853 Score = 113 bits (124), Expect = 5e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 |||| ||||| |||| ||||||||||| || || ||||| || ||| || || | Sbjct 1026362 CGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 1026303 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || |||||||| || ||||| || || ||||||||||| | || | || ||||||| Sbjct 1026302 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTG 1026243 Query 42114 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| || |||| ||| | | | |||||| || ||||| || | ||||| Sbjct 1026242 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGAT 1026184 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || || ||||| || ||||| || || || ||||| || Sbjct 1026183 CGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1026145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212351849440