Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq7 89.7 3e-13 seq3 89.7 3e-13 seq2 84.2 1e-11 >seq7 Length=1956921 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| ||| | || | || || ||||| ||||||||||| Sbjct 228618 TCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAG 228559 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || |||||||| || | || | ||||||||||| |||||| |||||| Sbjct 228558 ATGAGACGTTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 228499 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | |||| || || || || | || || || || || || || ||||| || Sbjct 228498 TCGATGGTATCACTGGATTCCACCTCCAGCGTGATCGTCTTCCCGGTCAGCGTCTTGACG 228439 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 228438 AAGATCTGCATA 228427 Score = 82.4 bits (90), Expect = 5e-11 Identities = 131/186 (70%), Gaps = 8/186 (4%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||| ||||| ||||| || ||| | || |||| || ||||| Sbjct 228110 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTCCGGCCATCTTCGAGCTG 228051 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || ||||| || || || || |||||||| |||| | ||||||||||| |||||| Sbjct 228050 CTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTT 227991 Query 34898 CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 | || || || | ||||| || || ||| || |||| || ||||| || | Sbjct 227990 CGACTTCAC--AT--TGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGC 227935 Query 34954 CCGTGA 34959 |||||| Sbjct 227934 CCGTGA 227929 >seq3 Length=4560853 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||||| || ||||| ||||| ||||| ||| | || |||| || Sbjct 1026356 ACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 1026297 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || |||||||| | || | ||||||||||| Sbjct 1026296 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 1026237 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | ||| || || | ||| || || || Sbjct 1026236 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 1026177 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 |||||||| ||||| || || |||||||| || Sbjct 1026176 CCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1026145 >seq2 Length=4704548 Score = 84.2 bits (92), Expect = 1e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| ||||| || ||| |||| |||| || ||||| || ||||| || || Sbjct 2063068 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 2063009 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 | ||| ||||| || | || | ||||||||||| ||||| ||||| | Sbjct 2063008 AATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2062949 Query 34914 ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAA 34972 |||| || || ||| || || | ||| ||||| || ||||| || |||||||| || Sbjct 2062948 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 2062890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633338872848