Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq3 91.5 1e-13
>seq3
Length=4560853
Score = 91.5 bits (100), Expect = 1e-13
Identities = 133/181 (73%), Gaps = 8/181 (4%)
Strand=Plus/Minus
Query 52016 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGTT 52075
||||||||| || || | ||| ||| | ||| |||| || |||||||| |||||
Sbjct 2766412 CGTCAAGGTTCGGGTGCGAACCACCAAGATCCCTCAGATCGGAGACAAGTTCGCGTCTCG 2766353
Query 52076 C-ACGGCGCAAAAGGGGACG--TGCGGAGCCGTCCTGACCCAGGAGGACATGCCCTTCGA 52132
| |||| |||||||| || || | | ||| | ||| | ||||||||||| || |
Sbjct 2766352 CCACGGT-CAAAAGGGTACTATTGGTGTGACGTACCGAC--AAGAGGACATGCCGTTT-A 2766297
Query 52133 CAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCATCCAGGATGA 52191
| || || || ||| ||||||| ||||||||||||||||||| ||||||| | ||||
Sbjct 2766296 CGAGAGAGGGCGTGACGCCCGACATCATCATCAACCCCCACGCTATTCCATCACGAATGA 2766237
Query 52192 C 52192
|
Sbjct 2766236 C 2766236
Score = 84.2 bits (92), Expect = 2e-11
Identities = 180/269 (67%), Gaps = 0/269 (0%)
Strand=Plus/Plus
Query 30115 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30174
||||| || || ||| || | ||||| | | | |||| ||| || || || ||
Sbjct 4220544 AGCTGGTCGACGCCCTGGCCTGTATAGTCGGTCTTTGCGTCCACGTAGTCGGCGCCAAAG 4220603
Query 30175 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30234
|||| ||||||||| ||||| || || |||||||| || |||| | ||| |||||
Sbjct 4220604 TGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCAACTTCGCGATGCGATAAGCCG 4220663
Query 30235 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAG 30294
|||| | | | || | || |||||| ||||||||||||| || ||| ||||
Sbjct 4220664 ACGCTGTCGAGATACTCGCGCGACCCGTTGCCGTCCCAGATCTTAACGCCCGCCTCGCTT 4220723
Query 30295 AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTC 30354
||| | || ||| ||| || |||||||| ||||| | | |||||||||
Sbjct 4220724 AGCGCAAGCGACGACGTGTTGCCTTCGATGAACCACAAGAGCTCGGCAATGACGGCCTTT 4220783
Query 30355 CAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383
||||| | ||| || || | |||||
Sbjct 4220784 AGGAAGACGCGCTTCGTTGTCAAAAGGGG 4220812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617271318218
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |