Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 1e-13 >seq3 Length=4560853 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/181 (73%), Gaps = 8/181 (4%) Strand=Plus/Minus Query 52016 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGTT 52075 ||||||||| || || | ||| ||| | ||| |||| || |||||||| ||||| Sbjct 2766412 CGTCAAGGTTCGGGTGCGAACCACCAAGATCCCTCAGATCGGAGACAAGTTCGCGTCTCG 2766353 Query 52076 C-ACGGCGCAAAAGGGGACG--TGCGGAGCCGTCCTGACCCAGGAGGACATGCCCTTCGA 52132 | |||| |||||||| || || | | ||| | ||| | ||||||||||| || | Sbjct 2766352 CCACGGT-CAAAAGGGTACTATTGGTGTGACGTACCGAC--AAGAGGACATGCCGTTT-A 2766297 Query 52133 CAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCATCCAGGATGA 52191 | || || || ||| ||||||| ||||||||||||||||||| ||||||| | |||| Sbjct 2766296 CGAGAGAGGGCGTGACGCCCGACATCATCATCAACCCCCACGCTATTCCATCACGAATGA 2766237 Query 52192 C 52192 | Sbjct 2766236 C 2766236 Score = 84.2 bits (92), Expect = 2e-11 Identities = 180/269 (67%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 30115 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30174 ||||| || || ||| || | ||||| | | | |||| ||| || || || || Sbjct 4220544 AGCTGGTCGACGCCCTGGCCTGTATAGTCGGTCTTTGCGTCCACGTAGTCGGCGCCAAAG 4220603 Query 30175 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30234 |||| ||||||||| ||||| || || |||||||| || |||| | ||| ||||| Sbjct 4220604 TGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCAACTTCGCGATGCGATAAGCCG 4220663 Query 30235 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAG 30294 |||| | | | || | || |||||| ||||||||||||| || ||| |||| Sbjct 4220664 ACGCTGTCGAGATACTCGCGCGACCCGTTGCCGTCCCAGATCTTAACGCCCGCCTCGCTT 4220723 Query 30295 AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTC 30354 ||| | || ||| ||| || |||||||| ||||| | | ||||||||| Sbjct 4220724 AGCGCAAGCGACGACGTGTTGCCTTCGATGAACCACAAGAGCTCGGCAATGACGGCCTTT 4220783 Query 30355 CAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 ||||| | ||| || || | ||||| Sbjct 4220784 AGGAAGACGCGCTTCGTTGTCAAAAGGGG 4220812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617271318218