Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq7 100 7e-16
seq3 84.2 5e-11
>seq7
Length=1956921
Score = 100 bits (110), Expect = 7e-16
Identities = 139/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || || || ||||| || ||||| | || ||||| || || || ||||
Sbjct 228214 CAAGACCCTTACTGGAAAGACCATCACCCTCGAGGTGGAGTCCTCGGATACTATCGACAA 228273
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| || || || || || || ||| ||| || | || |||||
Sbjct 228274 TGTTAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTGATCTT 228333
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||||||||||||| | |||||||| | ||| | ||||||||||| ||||||| |||||
Sbjct 228334 CGCCGGAAAGCAGCTCGAAGATGGCCGCACTCTCTCCGATTACAACATCCAGAAGGAGTC 228393
Query 206364 TACTCTTCACCTTGT 206378
|| || ||||||||
Sbjct 228394 GACGCTCCACCTTGT 228408
>seq3
Length=4560853
Score = 84.2 bits (92), Expect = 5e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| || || |||||||| | || ||||| ||| |||
Sbjct 1026151 CAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 1026210
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || || || || |||||| ||
Sbjct 1026211 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 1026270
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| | || ||||| | || || ||| |||||| ||
Sbjct 1026271 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATC 1026330
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| ||| || || ||||| ||
Sbjct 1026331 CAGAAGGAGAGCACCCTGCACCTGGT 1026356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181819800622786
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |