Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq7 105 6e-18
seq5 98.7 9e-16
>seq7
Length=1956921
Score = 105 bits (116), Expect = 6e-18
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962
|||| ||||| ||||| ||| | | | ||||| || || |||||||||||||| | |||
Sbjct 228648 CGCAGGCGCAGAACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTG 228589
Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022
|| || |||||||| || |||| | |||| ||||| || ||||| ||||| |||||
Sbjct 228588 CGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGATCGGGAGGGATGCCC 228529
Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082
|| || || || || || | | || | ||||| | | ||||| || | |
Sbjct 228528 TCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCACTGGATTCCACCTCCAGC 228469
Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | ||| || || ||||| || || | ||| ||||||||
Sbjct 228468 GTGATCGTCTTCCCGGTCAGCGTCTTGACGAAGATCTGCAT 228428
>seq5
Length=3886632
Score = 98.7 bits (108), Expect = 9e-16
Identities = 341/520 (66%), Gaps = 19/520 (4%)
Strand=Plus/Plus
Query 46758 GTGCCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCC 46817
|| || ||| ||||||| |||||| | |||||||| ||||| || | || | |
Sbjct 155034 GTCCCCTGCATTCGCAAGAAGGCCGACTGGGCCATCCGATGGATTCAGGACAAGGACTCG 155093
Query 46818 ACGCTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGG--GCA 46875
| | || ||||| || | || ||||| || || || | |||| ||| | |
Sbjct 155094 TCCTTTGCTCAGCGCCTGATTGCCTTCGCCGCCGTTGAGGG--TATTTTCTTCAGCGGTG 155151
Query 46876 GTTTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTA 46935
||||||| |||| || | | || | ||| | ||||| |||||||| ||| |
Sbjct 155152 CTTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCCA 155211
Query 46936 ACGAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCTCTATTACAAGA 46995
||||| | |||||||| ||||| || || ||||| ||||| || || || ||
Sbjct 155212 ACGAGCTCATCTCGCGAGACGAGGGTCTGCACACTGACTTCGCCTGCCTGCTGCACT--- 155268
Query 46996 CGCGCGTGAATGAGAAATTAAACTCGGACACGATCCT-GAGCATGT--TTAGGGAGGCGG 47052
| | | |||| ||| | | | | || | ||| || | | | || || |
Sbjct 155269 CCCACCTGAA---GAACCGTGCCAGCAAAAAGGTCATTGAGGATATCATCACCGACGCCG 155325
Query 47053 TGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACG 47112
| | ||| || |||||||||| || | ||| |||||| ||| |||| ||||||||||
Sbjct 155326 TTACCATTGAGCAGGAGTTTTTGACCGAGGCTCTGCCCTGCGCGCTGCTCGGCATGAACG 155385
Query 47113 CACAGTCT-ATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGA 47171
| | ||| ||| |||| |||||||| || || || || ||| | ||| || ||
Sbjct 155386 C-CGATCTGATGAAGCAATACATTGAGTTCGTTGCCGACCGCCTGCTCGTGGCCCT-GGG 155443
Query 47172 CAACCGAAATATTTTAATGCTCGT--AATCCGTTTGAGTTTATGAACAACATTTCGCTCG 47229
||| ||| | |||| |||| || || || || |||||| | ||||| || || |
Sbjct 155444 CAA-CGAGAAGGTTTACAAGTCGTCGAACCCCTTCGACTTTATGGAGAACATCTCCCTGG 155502
Query 47230 AGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269
||||| ||||| || |||||||| || || || || ||
Sbjct 155503 GCGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGCGACTA 155542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610806795760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |