Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq4 181 2e-39
seq5 125 1e-22
>seq4
Length=4519820
Score = 181 bits (200), Expect = 2e-39
Identities = 344/502 (69%), Gaps = 17/502 (3%)
Strand=Plus/Minus
Query 259682 CACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTT 259741
|||||||| | || ||| ||||||| | ||| ||| ||||| |||| ||||||
Sbjct 1716267 CACAAGGATGAGCTTGACTCTGCCATTGTCTACGACCGCGACTTCAACTACCAGTACTTC 1716208
Query 259742 GGTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAGCGG 259801
|| | |||| || || || |||||| ||| | || | |||| |||||
Sbjct 1716207 GGCTTCAAGACCCTGGAGCGATCATACCTGCTCAAGCTCAACGGCAAAATCGTTGAGCGT 1716148
Query 259802 CCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACAAT 259861
||||| | ||| ||||||||||||| ||||| |||||| || ||||||
Sbjct 1716147 CCCCAACACATGATCATGCGTGTCGCTGTTGGCA--TATGGG------GA----GACAAT 1716100
Query 259862 GCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCTCAGC 259920
| |||| || ||| || ||| | |||||| ||||| ||| |||||| ||
Sbjct 1716099 A---TTGAGCGTGTCATCGAGACGTACAACCTCATGTC-CAGCAAGTTCTTCACCCACGC 1716044
Query 259921 GACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTT 259980
||||||| || || ||||| ||||| || | | ||| || |||||||| ||| |
Sbjct 1716043 CTCGCCCACCCTTTTCAATGCAGGCACCCCTCAAGCCCAGTTGTCCTCGTGCTTCCTGGT 1715984
Query 259981 GGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCAT 260040
|||||||||| || || |||||||||||||| || |||||| ||| || | ||
Sbjct 1715983 CGACATGAAGGAGGACAGCATTGAGGGCATCTATGATACCCTCAAGACGTGTGCCATGAT 1715924
Query 260041 CTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTA 260100
||||||| ||| || ||||||||| | || ||| | |||||| | || | ||
Sbjct 1715923 CTCCAAGATGGCTGGTGGCATCGGTCTGAACGTTCACCGTATTCGCGCCACCGGGTCTTA 1715864
Query 260101 CGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160
| | || || ||||||||| |||||||| | |||||||||||||| || ||| |
Sbjct 1715863 CATTGCCGGTACCAACGGCACTTCCAACGGTGTCACTCCCATGCTTCGCGTCTTCAACAA 1715804
Query 260161 CACGGCGCGCTACGTCGACCAG 260182
||| || | |||||||| |||
Sbjct 1715803 CACTGCCAGATACGTCGATCAG 1715782
Score = 89.7 bits (98), Expect = 7e-12
Identities = 125/173 (72%), Gaps = 2/173 (1%)
Strand=Plus/Minus
Query 262114 GGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAGGACGCCGTCAACCTGACCAG 262173
|||||| | ||||| |||| || | |||| |||||||||| |||| ||||| | ||
Sbjct 1715461 GGCCCAGACGGAGACTGGCAACCCGTTCATGCTCTACAAGGATGCCGCCAACCGTAAGAG 1715402
Query 262174 CAACCAGCAGAACCTGGGCACCA-CGACAGAGGCCAACCTGTGCACCGAGATCGTCCAGT 262232
||||||| ||||||||||||| | | ||| |||| |||||||| |||||| || |||
Sbjct 1715401 CAACCAGAAGAACCTGGGCACTATCCGCAG-CTCCAATCTGTGCACAGAGATCATCGAGT 1715343
Query 262233 TTTCGTCGCCCACCGAGGCAAGTGTGTGCAACCTCTCGAGCGTGGCCCTGCCC 262285
|| |||| |||| ||||||||| | | |||||||||||
Sbjct 1715342 ACTCTGCGCCTGATGAGGTGGCCGTGTGCAACTTGGCATCTCTGGCCCTGCCC 1715290
>seq5
Length=3886632
Score = 125 bits (138), Expect = 1e-22
Identities = 182/252 (72%), Gaps = 4/252 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||| ||| ||||| || ||| | |||||| | | |||| | ||||| |||
Sbjct 155310 ATCATCACCGACGCCGTTACCATTGAGCAGGAGTTTTTGACCGAGGCTCTGCCCTGCGCG 155369
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| |||||||||||||| || ||| || ||||||| | || || ||||||||||
Sbjct 155370 CTGCTCGGCATGAACGCC-GATCTGATGAAGCAATACATTG-AGTTCGTTGCCGACCGCC 155427
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
|||||| ||| || ||| | |||||| ||| | || | ||||| ||| | |||
Sbjct 155428 TGCTCGTGGCCCTGGGCAAC-GAGAAGGTTTACAAGTCGTCGAACCCCTTCGACTTTATG 155486
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761
||| ||||| || | |||||||||||||| |||||| |||| |||||| |||
Sbjct 155487 GAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGCGACTACCAG 155546
Query 1456762 AAGGCCGGCGTC 1456773
||||||||||||
Sbjct 155547 AAGGCCGGCGTC 155558
Score = 111 bits (122), Expect = 2e-18
Identities = 205/296 (69%), Gaps = 5/296 (2%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || |||||||| || || || |||||||| || ||| | || |
Sbjct 154645 GATCTGGCAAATGTAC-AAGAAGGCCGAAGCATCATTCTGGACCGCAGAAGAGATTGATC 154703
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891
|| ||| | | ||||| ||| ||| ||| || ||| | | ||| ||
Sbjct 154704 TCTCAAAAGACTTGCACGACTGGAATAACCGCCTGAACGATGATGAGAGGTACTTCGTCT 154763
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||| |||| || ||| ||||| ||| || || ||||| ||| ||||| | ||
Sbjct 154764 CTCACATCCTGGC-TTTCTTCGCGGCCTCGGACGGTATCGTCAACGAAAACCTCGTCGAG 154822
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
|| || | || || || | || ||||| || | || || || |||||||||
Sbjct 154823 CGATTCAGCGGCGAAGTTCAGATCCCCGAGGCGCGATGCTTCTATGGCTTCCAGATCATG 154882
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
|| || ||||||||||| || || ||||| |||||||| ||||||||| |||||||
Sbjct 154883 ATGGAGAACATCCACTCCGAGACATACTCTCTCCTGATTGACACCTACATCAAGGA 154938
Score = 105 bits (116), Expect = 1e-16
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 332810 ACCTTTTCGGCGGCGACAATCTCGCGCAGGCGACCGGCGATTTGGGCGTCAGTGAGGCGC 332869
|||||||| || ||| |||| |||| || | ||| ||||||||| ||||| |
Sbjct 3151817 ACCTTTTCCGCCTCGATGATCTGCAGCAGCCGCTTGACGACTTGGGCGTCGGTGAGCTTC 3151758
Query 332870 ACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTG 332929
| |||| |||||||| || || |||||| | |||||||| | | ||| ||||
Sbjct 3151757 GCGTAGCGGAGGATGGCGCATCGTGACTGCAGCGGCTCGATGATCTTGTTGGACTGGTTG 3151698
Query 332930 CAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGT 332989
||||| | ||||| | |||||| || | | | ||||| ||| ||| |||||||||
Sbjct 3151697 CAGGCAAATGCAAATCTCGTCGTGTTAGAGTAGATCTCCATTGTCCTCCGCAGGGCCTGT 3151638
Query 332990 TGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGAT 333027
|| || | | ||| | || |||||| ||||| |||||
Sbjct 3151637 TGCGCTCCAGACGTCATGCTGTCGGCTTCGTCCAGGAT 3151600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177804834178692
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |