Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq4 181 2e-39 seq5 125 1e-22 >seq4 Length=4519820 Score = 181 bits (200), Expect = 2e-39 Identities = 344/502 (69%), Gaps = 17/502 (3%) Strand=Plus/Minus Query 259682 CACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTT 259741 |||||||| | || ||| ||||||| | ||| ||| ||||| |||| |||||| Sbjct 1716267 CACAAGGATGAGCTTGACTCTGCCATTGTCTACGACCGCGACTTCAACTACCAGTACTTC 1716208 Query 259742 GGTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAGCGG 259801 || | |||| || || || |||||| ||| | || | |||| ||||| Sbjct 1716207 GGCTTCAAGACCCTGGAGCGATCATACCTGCTCAAGCTCAACGGCAAAATCGTTGAGCGT 1716148 Query 259802 CCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACAAT 259861 ||||| | ||| ||||||||||||| ||||| |||||| || |||||| Sbjct 1716147 CCCCAACACATGATCATGCGTGTCGCTGTTGGCA--TATGGG------GA----GACAAT 1716100 Query 259862 GCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCTCAGC 259920 | |||| || ||| || ||| | |||||| ||||| ||| |||||| || Sbjct 1716099 A---TTGAGCGTGTCATCGAGACGTACAACCTCATGTC-CAGCAAGTTCTTCACCCACGC 1716044 Query 259921 GACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTT 259980 ||||||| || || ||||| ||||| || | | ||| || |||||||| ||| | Sbjct 1716043 CTCGCCCACCCTTTTCAATGCAGGCACCCCTCAAGCCCAGTTGTCCTCGTGCTTCCTGGT 1715984 Query 259981 GGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCAT 260040 |||||||||| || || |||||||||||||| || |||||| ||| || | || Sbjct 1715983 CGACATGAAGGAGGACAGCATTGAGGGCATCTATGATACCCTCAAGACGTGTGCCATGAT 1715924 Query 260041 CTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTA 260100 ||||||| ||| || ||||||||| | || ||| | |||||| | || | || Sbjct 1715923 CTCCAAGATGGCTGGTGGCATCGGTCTGAACGTTCACCGTATTCGCGCCACCGGGTCTTA 1715864 Query 260101 CGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160 | | || || ||||||||| |||||||| | |||||||||||||| || ||| | Sbjct 1715863 CATTGCCGGTACCAACGGCACTTCCAACGGTGTCACTCCCATGCTTCGCGTCTTCAACAA 1715804 Query 260161 CACGGCGCGCTACGTCGACCAG 260182 ||| || | |||||||| ||| Sbjct 1715803 CACTGCCAGATACGTCGATCAG 1715782 Score = 89.7 bits (98), Expect = 7e-12 Identities = 125/173 (72%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 262114 GGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAGGACGCCGTCAACCTGACCAG 262173 |||||| | ||||| |||| || | |||| |||||||||| |||| ||||| | || Sbjct 1715461 GGCCCAGACGGAGACTGGCAACCCGTTCATGCTCTACAAGGATGCCGCCAACCGTAAGAG 1715402 Query 262174 CAACCAGCAGAACCTGGGCACCA-CGACAGAGGCCAACCTGTGCACCGAGATCGTCCAGT 262232 ||||||| ||||||||||||| | | ||| |||| |||||||| |||||| || ||| Sbjct 1715401 CAACCAGAAGAACCTGGGCACTATCCGCAG-CTCCAATCTGTGCACAGAGATCATCGAGT 1715343 Query 262233 TTTCGTCGCCCACCGAGGCAAGTGTGTGCAACCTCTCGAGCGTGGCCCTGCCC 262285 || |||| |||| ||||||||| | | ||||||||||| Sbjct 1715342 ACTCTGCGCCTGATGAGGTGGCCGTGTGCAACTTGGCATCTCTGGCCCTGCCC 1715290 >seq5 Length=3886632 Score = 125 bits (138), Expect = 1e-22 Identities = 182/252 (72%), Gaps = 4/252 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| ||| ||||| || ||| | |||||| | | |||| | ||||| ||| Sbjct 155310 ATCATCACCGACGCCGTTACCATTGAGCAGGAGTTTTTGACCGAGGCTCTGCCCTGCGCG 155369 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || |||||||||||||| || ||| || ||||||| | || || |||||||||| Sbjct 155370 CTGCTCGGCATGAACGCC-GATCTGATGAAGCAATACATTG-AGTTCGTTGCCGACCGCC 155427 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||||| ||| || ||| | |||||| ||| | || | ||||| ||| | ||| Sbjct 155428 TGCTCGTGGCCCTGGGCAAC-GAGAAGGTTTACAAGTCGTCGAACCCCTTCGACTTTATG 155486 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 ||| ||||| || | |||||||||||||| |||||| |||| |||||| ||| Sbjct 155487 GAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTTGGCGACTACCAG 155546 Query 1456762 AAGGCCGGCGTC 1456773 |||||||||||| Sbjct 155547 AAGGCCGGCGTC 155558 Score = 111 bits (122), Expect = 2e-18 Identities = 205/296 (69%), Gaps = 5/296 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || |||||||| || || || |||||||| || ||| | || | Sbjct 154645 GATCTGGCAAATGTAC-AAGAAGGCCGAAGCATCATTCTGGACCGCAGAAGAGATTGATC 154703 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 || ||| | | ||||| ||| ||| ||| || ||| | | ||| || Sbjct 154704 TCTCAAAAGACTTGCACGACTGGAATAACCGCCTGAACGATGATGAGAGGTACTTCGTCT 154763 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||| |||| || ||| ||||| ||| || || ||||| ||| ||||| | || Sbjct 154764 CTCACATCCTGGC-TTTCTTCGCGGCCTCGGACGGTATCGTCAACGAAAACCTCGTCGAG 154822 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || | || || || | || ||||| || | || || || ||||||||| Sbjct 154823 CGATTCAGCGGCGAAGTTCAGATCCCCGAGGCGCGATGCTTCTATGGCTTCCAGATCATG 154882 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 || || ||||||||||| || || ||||| |||||||| ||||||||| ||||||| Sbjct 154883 ATGGAGAACATCCACTCCGAGACATACTCTCTCCTGATTGACACCTACATCAAGGA 154938 Score = 105 bits (116), Expect = 1e-16 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 332810 ACCTTTTCGGCGGCGACAATCTCGCGCAGGCGACCGGCGATTTGGGCGTCAGTGAGGCGC 332869 |||||||| || ||| |||| |||| || | ||| ||||||||| ||||| | Sbjct 3151817 ACCTTTTCCGCCTCGATGATCTGCAGCAGCCGCTTGACGACTTGGGCGTCGGTGAGCTTC 3151758 Query 332870 ACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTG 332929 | |||| |||||||| || || |||||| | |||||||| | | ||| |||| Sbjct 3151757 GCGTAGCGGAGGATGGCGCATCGTGACTGCAGCGGCTCGATGATCTTGTTGGACTGGTTG 3151698 Query 332930 CAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGT 332989 ||||| | ||||| | |||||| || | | | ||||| ||| ||| ||||||||| Sbjct 3151697 CAGGCAAATGCAAATCTCGTCGTGTTAGAGTAGATCTCCATTGTCCTCCGCAGGGCCTGT 3151638 Query 332990 TGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGAT 333027 || || | | ||| | || |||||| ||||| ||||| Sbjct 3151637 TGCGCTCCAGACGTCATGCTGTCGGCTTCGTCCAGGAT 3151600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177804834178692