Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq4 145 1e-29 seq5 84.2 3e-11 >seq4 Length=4519820 Score = 145 bits (160), Expect = 1e-29 Identities = 626/980 (64%), Gaps = 16/980 (2%) Strand=Plus/Plus Query 69267 CAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTAT 69326 ||| || | |||||| | || || || || ||||||| || | || | || || Sbjct 1715293 CAGGGCCAGAGATGCCAAGTTGCACACGGCCACCTCATCAGGCGCAGAGTACTCGATGAT 1715352 Query 69327 CTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTT 69386 |||||| || ||||| | |||||| ||||| || | ||| || ||||| ||| Sbjct 1715353 CTCTGTGCACAGATTGGAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTACGGTT 1715412 Query 69387 ACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGA 69446 ||| |||||||| || || ||||| | ||||| || |||| | || | || || Sbjct 1715413 GGCGGCATCCTTGTAGAGCATGAACGGGTTGCCAGTCTCCGTCTGGGCCTCCAAGATGGA 1715472 Query 69447 TTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTT---CTCTTTTTCATA-TT 69502 | ||| | | || || ||||||| | || || || || || || Sbjct 1715473 ATACCACAGCTTCTGCGCCCGAAT---GGTCTTGCGGCCTTTGCCCTGCTTCTCGTACTT 1715529 Query 69503 GT-GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTT 69561 | ||| | |||| ||||| || || || | |||| ||| ||||| || || || Sbjct 1715530 CTCGTACAGAGCC--TCGAACTCTTCGCCGTAGCAATCAGCCAGGCCAGGGCACTCGTTG 1715587 Query 69562 GGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATC 69621 || ||||| | | ||| | ||| | || || || ||||| || |||||||| ||| Sbjct 1715588 GGGCACATGAGGGTCCAGTCGCCATTCTTCTCGACACGCTTCATGAAAAGATCGGGGATC 1715647 Query 69622 CAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGA 69681 || ||||| | || | || | || | | || || || || || || ||| Sbjct 1715648 CACAGAGCAAGGAACAAGTCACGGGCACGAACCTCCTCCTTGCCATGGTTCTTCCGCAGA 1715707 Query 69682 TCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGT 69741 ||||| ||||| | | || | ||||| || || || || || || | | || ||| Sbjct 1715708 TCGAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCCAGGTAGATGGCAAAAGCGCCGGGT 1715767 Query 69742 CGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGA 69801 || || || || |||||||| | ||||||||||||||| || |||| | ||||| ||| Sbjct 1715768 CGCTTGTTGCCACCCTGATCGACGTATCTGGCAGTGTTGTTGAAGACGCGAAGCATGGGA 1715827 Query 69802 ATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTA 69861 | | ||| || || | || || || || | ||| ||| || | ||||||||| Sbjct 1715828 GTGACACCGTTGGAAGTGCCGTTGGTACCGGCAATGTAAGACCCGGTGGCGCGAATACGG 1715887 Query 69862 CTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGT-TTCAATGT 69920 || ||||| || || || ||||| || ||||| | |||| |||| || | || Sbjct 1715888 TGAACGTTCAGACCGATGCCACCAGCCATCTTGGAGATCATGGCAC-ACGTCTTGAGGGT 1715946 Query 69921 GTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTG 69980 ||||| || ||||| ||||| || || |||||| | || || || |||| || Sbjct 1715947 ATCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACCAGGAAGCACGAGGACAACTG 1716006 Query 69981 ATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGA 70040 || || || ||||| || | || || || ||||| ||||| | || || Sbjct 1716007 GGCTTGAGGGGTGCCTGCATTGAAAAGGGTGGGCGAGGCGTGGGTGAAGAACTTGCTGGA 1716066 Query 70041 AAGCAGATTGTATGTTTCAATAGCTGATTCTATAT--CCCACTGATGAATTCCTATCGCG 70098 | || ||||| || || || | || |||| | | || || || | ||| Sbjct 1716067 CATGAGGTTGTACGTCTCGATGACACGCTCAATATTGTCTCCCCAT--ATGCCAACAGCG 1716124 Query 70099 ACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTAT 70158 |||||||| | ||| || || || || || || |||| || | || | ||||||| Sbjct 1716125 ACACGCATGATCATGTGTTGGGGACGCTCAACGATTTTGCCGTTGAGCTTGAGCAGGTAT 1716184 Query 70159 GATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATA 70218 ||| ||||| || || || || || || | ||| ||||| | ||||| | ||| Sbjct 1716185 GATCGCTCCAGGGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACAATG 1716244 Query 70219 ACAGAATTTAGTTTATCCTT 70238 |||| | || | |||||| Sbjct 1716245 GCAGAGTCAAGCTCATCCTT 1716264 >seq5 Length=3886632 Score = 84.2 bits (92), Expect = 3e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||||||||||||| || || ||||| |||| || | ||||| || || || || Sbjct 155258 GCAGGCGAAGTCAGTGTGCAGACCCTCGTCTCGCGAGATGAGCTCGTTGGAGAAGGTCAG 155199 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 |||||||| || |||||||| |||||||| || |||| ||||||| || ||||| Sbjct 155198 GCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAGAA 155139 Query 39736 GATGCCTTCTACTGCTGCAAATGCAA 39761 || || || || || || || |||| Sbjct 155138 AATACCCTCAACGGCGGCGAAGGCAA 155113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908233300240