Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5 107 2e-18 >seq5 Length=3886632 Score = 107 bits (118), Expect = 2e-18 Identities = 298/453 (66%), Gaps = 8/453 (2%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| ||||| ||||||||||||||||| ||||| ||| ||| | ||| ||||||||| Sbjct 155542 TAGTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCATA 155483 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || |||||| || || ||| | || | ||| ||| || || Sbjct 155482 AAGTCGAAGGGGTTCGACGACTTGTAAACCTTCTCGTTGCCCAGGGCCAC-GAGCAGGCG 155424 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | ||| |||||||||| | |||| |||| |||||| |||| || || Sbjct 155423 GTCGGCAACGAACTCAATGTATTGCTTCATCAGATCGGCGTTCATGCCGAGCAGCGCGCA 155364 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || || || || | ||| ||| ||||||| || || || | ||| | | Sbjct 155363 GGGCAGAGCCTCGGTCAAAAACTCCTGCTCAATGGTAACGGCGTCGGTGATGATATCCTC 155304 Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GCAAACTC 130023 |||| || ||| | | || || | | || | || | || || || Sbjct 155303 AATGACCTTTTTGCTGGCACGGTTCTTCAGG---TGGGAGTGCAGCAGGCAGGCGAAGTC 155247 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| ||||||||||| || |||||||| || || |||||| ||| || |||||||| Sbjct 155246 AGTGTGCAGACCCTCGTCTCGCGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAG 155187 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 || |||||||| | |||||| || | ||| | || |||||| || ||||| || Sbjct 155186 GCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAGAAAATACCCTCAAC 155127 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 130176 ||||| |||| || |||| ||||||||| Sbjct 155126 GGCGGCGAAGGCAATCAGGCGCTGAGCAAAGGA 155094 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 14237 CCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCA 14296 |||| |||||| ||||| |||||||| | || || || || | ||| | | || Sbjct 2995162 CCGATGGCGTCGATTTCGTCGATGAAGATAATGCACGGCGCGTTCTTGCGGCCCTCGGCA 2995221 Query 14297 AAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCG 14356 || | ||| || |||| | |||||||| ||||||||||||||||| | || | || Sbjct 2995222 AACAAATCGCGGACTCGAGATGGTCCGACACCGACAAACATCTCCACAAACTCGGAGCCG 2995281 Query 14357 -GAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTT 14415 ||| || | ||| || || ||| || || ||| | || |||||| || ||||| Sbjct 2995282 CTGACACTGTA-GAACGGCACACCAGACTCTCCAGCGGTTGCCTTGGCGAGAAGAGTCTT 2995340 Query 14416 CCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 ||||| || ||| ||| ||||| | ||||| || |||||| |||| || Sbjct 2995341 GCCCGTTCCCGGTGGCCCGGCGAGGATAGCACCGCGGGGGATCTTGGCTCC 2995391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434689790960