Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq7 123 8e-23 seq4 107 6e-18 >seq7 Length=1956921 Score = 123 bits (136), Expect = 8e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | ||||| ||||| || |||||||| || || || || || || Sbjct 228658 CATACCACCGCGCAGGCGCAGAACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTC 228599 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | || || || || || || || ||||| |||||||| |||||||||||||| || Sbjct 228598 GCTGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGATCGGG 228539 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || ||||| || || | || || || || || | |||| | ||| Sbjct 228538 AGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCACTGGATTC 228479 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| ||||| || || || || || |||||||| Sbjct 228478 CACCTCCAGCGTGATCGTCTTCCCGGTCAGCGTCTTGACGAAGATCTGCAT 228428 Score = 111 bits (122), Expect = 5e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| || || || ||||| || || || || ||||| Sbjct 228430 CATACCACCACGGAGACGCAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATC 228371 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || |||||||| || || ||||| || ||||| || || ||||| || || Sbjct 228370 GGAGAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGG 228311 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || || ||||| || || | || ||||| || || | ||| || | || Sbjct 228310 CGGGATGCCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATAGTATCCGAGGACTC 228251 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || || || | |||||||| || || || || || Sbjct 228250 CACCTCGAGGGTGATGGTCTTTCCAGTAAGGGTCTTGAC 228212 Score = 89.7 bits (98), Expect = 2e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 140546 CTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 140605 ||| || || ||||| || || | || || || || || || || || |||||||| Sbjct 228847 CTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCGTCCTCCAGCTGCTTGCCAGCAAA 228788 Query 140606 GATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATT 140665 ||| ||||| ||||| || || ||||| || || || |||||||| || | || ||||| Sbjct 228787 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACATT 228728 Query 140666 ATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || || | ||| | ||| || || | || | ||||| ||||| | || || || Sbjct 228727 GTCGATGGTATCGCTCGATTCCACCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGAC 228668 Query 140726 AAAAATCTGCAT 140737 ||| |||||||| Sbjct 228667 AAAGATCTGCAT 228656 >seq4 Length=4519820 Score = 107 bits (118), Expect = 6e-18 Identities = 104/133 (78%), Gaps = 3/133 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || |||||||| | || |||||| || || | |||||||||||||||||| || || Sbjct 2362081 CGCGGCACACCGAGGGTGACATTC---TTGGACGAAACACCAGCAAAGTGGAAGGTGTTC 2362025 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | ||||| | |||||||||||| ||||| ||||| | ||||||||||| || Sbjct 2362024 AGCGTCATCTGAGTGGCGGGCTCACCAATGGACTGTGCTGCCAAGACGCCAACCATCTCG 2361965 Query 377578 CCAGGATTGACAA 377590 ||||| |||||| Sbjct 2361964 CCAGGGCTGACAA 2361952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253118662998