Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq7 123 8e-23
seq4 107 6e-18
>seq7
Length=1956921
Score = 123 bits (136), Expect = 8e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||||||||| || | | ||||| ||||| || |||||||| || || || || || ||
Sbjct 228658 CATACCACCGCGCAGGCGCAGAACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTC 228599
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
| || || || || || || || ||||| |||||||| |||||||||||||| ||
Sbjct 228598 GCTGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGATCGGG 228539
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||| || || || || ||||| || || | || || || || || | |||| | |||
Sbjct 228538 AGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCACTGGATTC 228479
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || | ||||| ||||| || || || || || ||||||||
Sbjct 228478 CACCTCCAGCGTGATCGTCTTCCCGGTCAGCGTCTTGACGAAGATCTGCAT 228428
Score = 111 bits (122), Expect = 5e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || ||||| || || || ||||| || || || || |||||
Sbjct 228430 CATACCACCACGGAGACGCAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATC 228371
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || |||||||| || || ||||| || ||||| || || ||||| || ||
Sbjct 228370 GGAGAGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGG 228311
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || ||||| || || | || ||||| || || | ||| || | ||
Sbjct 228310 CGGGATGCCCTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATAGTATCCGAGGACTC 228251
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
|| || || || | |||||||| || || || || ||
Sbjct 228250 CACCTCGAGGGTGATGGTCTTTCCAGTAAGGGTCTTGAC 228212
Score = 89.7 bits (98), Expect = 2e-12
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 140546 CTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 140605
||| || || ||||| || || | || || || || || || || || ||||||||
Sbjct 228847 CTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCGTCCTCCAGCTGCTTGCCAGCAAA 228788
Query 140606 GATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATT 140665
||| ||||| ||||| || || ||||| || || || |||||||| || | || |||||
Sbjct 228787 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACATT 228728
Query 140666 ATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
|| || | ||| | ||| || || | || | ||||| ||||| | || || ||
Sbjct 228727 GTCGATGGTATCGCTCGATTCCACCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGAC 228668
Query 140726 AAAAATCTGCAT 140737
||| ||||||||
Sbjct 228667 AAAGATCTGCAT 228656
>seq4
Length=4519820
Score = 107 bits (118), Expect = 6e-18
Identities = 104/133 (78%), Gaps = 3/133 (2%)
Strand=Plus/Minus
Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517
|| |||||||| | || |||||| || || | |||||||||||||||||| || ||
Sbjct 2362081 CGCGGCACACCGAGGGTGACATTC---TTGGACGAAACACCAGCAAAGTGGAAGGTGTTC 2362025
Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577
|| || | ||||| | |||||||||||| ||||| ||||| | ||||||||||| ||
Sbjct 2362024 AGCGTCATCTGAGTGGCGGGCTCACCAATGGACTGTGCTGCCAAGACGCCAACCATCTCG 2361965
Query 377578 CCAGGATTGACAA 377590
||||| ||||||
Sbjct 2361964 CCAGGGCTGACAA 2361952
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515253118662998
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |