Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq4 118 1e-21
seq3 105 6e-18
>seq4
Length=4519820
Score = 118 bits (130), Expect = 1e-21
Identities = 272/400 (68%), Gaps = 10/400 (3%)
Strand=Plus/Plus
Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282
||||| ||||| ||||| || || | ||||| || |||| ||||| ||||||||
Sbjct 3031049 CCGCTCCTGACCACGAAGCGCGTCTTTCTGAAGGCAGTCGTCGCCGAGCTCTTGTGGTTC 3031108
Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGG--GGGGTGAAGATCTGGGACG 34340
| ||| |||| | | || ||| | || || || |||||||||||||
Sbjct 3031109 ATCGAGGGCAACACGTCGTC--ACTCGCGCTCAGCGAGGCCGGCGTCAAGATCTGGGACG 3031166
Query 34341 CTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGT-TCCCATCTCGGGAGGAGGGCGAC 34399
||||||| || || | ||| || | ||| || || | ||| |||| ||||||
Sbjct 3031167 GCAACGGGTCGCGCGAGTATCTCGATA-GCGTCGGCCTCTCGCATCGCGAGGTCGGCGAC 3031225
Query 34400 TTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAA 34459
| ||||| |||||||| ||||||||| | |||||||| || | || || | |||||
Sbjct 3031226 CTAGGCCCCGTCTACGGCTTCCAGTGGCGGCACTTTGGCGCCAACTA-CGTAGATGCGAA 3031284
Query 34460 G-CGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAGTACGTGATCGACACCTTGAAGC 34517
| ||||||| |||| ||||| | ||||| || || | |||| || | | || |
Sbjct 3031285 GACGGACTACACGGGCCAGGGCGTCGACCAACTCGCCG-ACGTAATACATAAGCTGCGGA 3031343
Query 34518 GGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGA 34577
||| || | ||| | | || | |||| ||||||||||| |||||||| | |
Sbjct 3031344 CGAAGCCGTACGACCGTCGCATAATCATGTCTGCGTGGAACCCCAAGGATCTGGCGAACA 3031403
Query 34578 TGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT 34617
|||| || || |||||||||| || ||| ||||||||
Sbjct 3031404 TGGCCCTACCACCGTGCCACATGTTCGCCCAGTTCTACGT 3031443
Score = 118 bits (130), Expect = 1e-21
Identities = 272/400 (68%), Gaps = 10/400 (3%)
Strand=Plus/Minus
Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787
|||||||| ||| || |||||||||| || || ||||| | |||||||| |||
Sbjct 3031443 ACGTAGAACTGGGCGAACATGTGGCACGGTGGTAGGGCCATGTTCGCCAGATCCTTGGGG 3031384
Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847
|||||||| |||| | || | | ||| | || ||| | || | | || |||
Sbjct 3031383 TTCCACGCAGACATGATTATGCGACGGTCGTACGGCTTCGTCCGCAGCTTATGTATTACG 3031324
Query 6848 TACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCG 6905
| | || || ||||| | ||||| |||| ||||||| |||||| | || || | |
Sbjct 3031323 T-CGGCGAGTTGGTCGACGCCCTGGCCCGTGTAGTCCGTCTTCGCATCTACG-TAGTTGG 3031266
Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG 6965
| |||||||| | ||||||||| |||||||| ||||| | |||||| |||| ||| |
Sbjct 3031265 CGCCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCTAGGTCGCCGACCTCGCGATGCG 3031206
Query 6966 GGA-ACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC- 7023
|| || ||| | || ||| | || || ||||||| ||||||||||||| || ||
Sbjct 3031205 AGAGGCCGACGC-TATCGAGATACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACGCCG 3031147
Query 7024 -CCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGA 7082
|| | ||| || | | |||| ||| | |||||||| ||||| |||
Sbjct 3031146 GCCTCGCTGAGCGCGAGT--GACGACGTGTTGCCCTCGATGAACCACAAGAGCTCGGCGA 3031089
Query 7083 CCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122
| || ||||| | || || ||||| ||||| |||||
Sbjct 3031088 CGACTGCCTTCAGAAAGACGCGCTTCGTGGTCAGGAGCGG 3031049
>seq3
Length=4560853
Score = 105 bits (116), Expect = 6e-18
Identities = 208/300 (69%), Gaps = 6/300 (2%)
Strand=Plus/Plus
Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787
|||||||| ||| || | |||||||| || || ||||| | |||| | |||
Sbjct 4220418 ACGTAGAACTGGGCGAACATATGGCACGGTGGTAGGGCCATGCTTTTCAAATCCCTAGGG 4220477
Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847
|||||||| |||| | || | | || | || || | || | || || |||
Sbjct 4220478 TTCCACGCAGACATAATTATGCGGCGATCGTATGGCTTTGTCCGCAGCTTTTCTATTACG 4220537
Query 6848 TACTGCA-GCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCG 6905
| | ||| ||||||| | ||||| || | |||||| | ||| || || || || || |
Sbjct 4220538 T-CGGCAAGCTGGTCGACGCCCTGGCCTGTATAGTCGGTCTTTGCGTCCACG-TAGTCGG 4220595
Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG 6965
| |||||||| | ||||||||| |||||||| ||||||| |||||| | || ||| |
Sbjct 4220596 CGCCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCAACTTCGCGATGCG 4220655
Query 6966 GGAACCCC-CGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024
|| || |||| ||| ||| | || || ||||||| ||||||||||||| || |||
Sbjct 4220656 ATAAGCCGACGCT-GTCGAGATACTCGCGCGACCCGTTGCCGTCCCAGATCTTAACGCCC 4220714
Score = 105 bits (116), Expect = 6e-18
Identities = 208/300 (69%), Gaps = 6/300 (2%)
Strand=Plus/Minus
Query 34321 GGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCG-GGGGTTCC 34379
||| || ||||||||||||| ||||||| || || | ||| ||| |||| || ||
Sbjct 4220714 GGGCGTTAAGATCTGGGACGGCAACGGGTCGCGCGAGTATCTCGAC-AGCGTCGGCTTAT 4220656
Query 34380 CATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGG 34439
| ||| || | |||||| ||||||| |||||||| ||||||||| | |||||||| |
Sbjct 4220655 CGCATCGCGAAGTTGGCGACCTGGGCCCCGTCTACGGCTTCCAGTGGCGGCACTTTGGCG 4220596
Query 34440 CGGAGTATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGC-TGCAGTA 34497
| || || || || || ||| | |||||| | || ||||| | ||||||| ||| | |
Sbjct 4220595 CCGACTA-CGTGGACGCAAAGACCGACTATACAGGCCAGGGCGTCGACCAGCTTGCCG-A 4220538
Query 34498 CGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAA 34557
||| || || | || | || || | || | | || | |||| ||||||||
Sbjct 4220537 CGTAATAGAAAAGCTGCGGACAAAGCCATACGATCGCCGCATAATTATGTCTGCGTGGAA 4220478
Query 34558 CCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT 34617
||| | |||| | ||||| || || |||||||| | || ||| ||||||||
Sbjct 4220477 CCCTAGGGATTTGAAAAGCATGGCCCTACCACCGTGCCATATGTTCGCCCAGTTCTACGT 4220418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448262030183520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |