Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq4 118 1e-21 seq3 105 6e-18 >seq4 Length=4519820 Score = 118 bits (130), Expect = 1e-21 Identities = 272/400 (68%), Gaps = 10/400 (3%) Strand=Plus/Plus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 ||||| ||||| ||||| || || | ||||| || |||| ||||| |||||||| Sbjct 3031049 CCGCTCCTGACCACGAAGCGCGTCTTTCTGAAGGCAGTCGTCGCCGAGCTCTTGTGGTTC 3031108 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGG--GGGGTGAAGATCTGGGACG 34340 | ||| |||| | | || ||| | || || || ||||||||||||| Sbjct 3031109 ATCGAGGGCAACACGTCGTC--ACTCGCGCTCAGCGAGGCCGGCGTCAAGATCTGGGACG 3031166 Query 34341 CTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGT-TCCCATCTCGGGAGGAGGGCGAC 34399 ||||||| || || | ||| || | ||| || || | ||| |||| |||||| Sbjct 3031167 GCAACGGGTCGCGCGAGTATCTCGATA-GCGTCGGCCTCTCGCATCGCGAGGTCGGCGAC 3031225 Query 34400 TTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAA 34459 | ||||| |||||||| ||||||||| | |||||||| || | || || | ||||| Sbjct 3031226 CTAGGCCCCGTCTACGGCTTCCAGTGGCGGCACTTTGGCGCCAACTA-CGTAGATGCGAA 3031284 Query 34460 G-CGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAGTACGTGATCGACACCTTGAAGC 34517 | ||||||| |||| ||||| | ||||| || || | |||| || | | || | Sbjct 3031285 GACGGACTACACGGGCCAGGGCGTCGACCAACTCGCCG-ACGTAATACATAAGCTGCGGA 3031343 Query 34518 GGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGA 34577 ||| || | ||| | | || | |||| ||||||||||| |||||||| | | Sbjct 3031344 CGAAGCCGTACGACCGTCGCATAATCATGTCTGCGTGGAACCCCAAGGATCTGGCGAACA 3031403 Query 34578 TGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT 34617 |||| || || |||||||||| || ||| |||||||| Sbjct 3031404 TGGCCCTACCACCGTGCCACATGTTCGCCCAGTTCTACGT 3031443 Score = 118 bits (130), Expect = 1e-21 Identities = 272/400 (68%), Gaps = 10/400 (3%) Strand=Plus/Minus Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787 |||||||| ||| || |||||||||| || || ||||| | |||||||| ||| Sbjct 3031443 ACGTAGAACTGGGCGAACATGTGGCACGGTGGTAGGGCCATGTTCGCCAGATCCTTGGGG 3031384 Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847 |||||||| |||| | || | | ||| | || ||| | || | | || ||| Sbjct 3031383 TTCCACGCAGACATGATTATGCGACGGTCGTACGGCTTCGTCCGCAGCTTATGTATTACG 3031324 Query 6848 TACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCG 6905 | | || || ||||| | ||||| |||| ||||||| |||||| | || || | | Sbjct 3031323 T-CGGCGAGTTGGTCGACGCCCTGGCCCGTGTAGTCCGTCTTCGCATCTACG-TAGTTGG 3031266 Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG 6965 | |||||||| | ||||||||| |||||||| ||||| | |||||| |||| ||| | Sbjct 3031265 CGCCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCTAGGTCGCCGACCTCGCGATGCG 3031206 Query 6966 GGA-ACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC- 7023 || || ||| | || ||| | || || ||||||| ||||||||||||| || || Sbjct 3031205 AGAGGCCGACGC-TATCGAGATACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACGCCG 3031147 Query 7024 -CCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGA 7082 || | ||| || | | |||| ||| | |||||||| ||||| ||| Sbjct 3031146 GCCTCGCTGAGCGCGAGT--GACGACGTGTTGCCCTCGATGAACCACAAGAGCTCGGCGA 3031089 Query 7083 CCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122 | || ||||| | || || ||||| ||||| ||||| Sbjct 3031088 CGACTGCCTTCAGAAAGACGCGCTTCGTGGTCAGGAGCGG 3031049 >seq3 Length=4560853 Score = 105 bits (116), Expect = 6e-18 Identities = 208/300 (69%), Gaps = 6/300 (2%) Strand=Plus/Plus Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787 |||||||| ||| || | |||||||| || || ||||| | |||| | ||| Sbjct 4220418 ACGTAGAACTGGGCGAACATATGGCACGGTGGTAGGGCCATGCTTTTCAAATCCCTAGGG 4220477 Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACG 6847 |||||||| |||| | || | | || | || || | || | || || ||| Sbjct 4220478 TTCCACGCAGACATAATTATGCGGCGATCGTATGGCTTTGTCCGCAGCTTTTCTATTACG 4220537 Query 6848 TACTGCA-GCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATACTCCG 6905 | | ||| ||||||| | ||||| || | |||||| | ||| || || || || || | Sbjct 4220538 T-CGGCAAGCTGGTCGACGCCCTGGCCTGTATAGTCGGTCTTTGCGTCCACG-TAGTCGG 4220595 Query 6906 CCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG 6965 | |||||||| | ||||||||| |||||||| ||||||| |||||| | || ||| | Sbjct 4220596 CGCCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCAACTTCGCGATGCG 4220655 Query 6966 GGAACCCC-CGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCC 7024 || || |||| ||| ||| | || || ||||||| ||||||||||||| || ||| Sbjct 4220656 ATAAGCCGACGCT-GTCGAGATACTCGCGCGACCCGTTGCCGTCCCAGATCTTAACGCCC 4220714 Score = 105 bits (116), Expect = 6e-18 Identities = 208/300 (69%), Gaps = 6/300 (2%) Strand=Plus/Minus Query 34321 GGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCG-GGGGTTCC 34379 ||| || ||||||||||||| ||||||| || || | ||| ||| |||| || || Sbjct 4220714 GGGCGTTAAGATCTGGGACGGCAACGGGTCGCGCGAGTATCTCGAC-AGCGTCGGCTTAT 4220656 Query 34380 CATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGG 34439 | ||| || | |||||| ||||||| |||||||| ||||||||| | |||||||| | Sbjct 4220655 CGCATCGCGAAGTTGGCGACCTGGGCCCCGTCTACGGCTTCCAGTGGCGGCACTTTGGCG 4220596 Query 34440 CGGAGTATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGC-TGCAGTA 34497 | || || || || || ||| | |||||| | || ||||| | ||||||| ||| | | Sbjct 4220595 CCGACTA-CGTGGACGCAAAGACCGACTATACAGGCCAGGGCGTCGACCAGCTTGCCG-A 4220538 Query 34498 CGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAA 34557 ||| || || | || | || || | || | | || | |||| |||||||| Sbjct 4220537 CGTAATAGAAAAGCTGCGGACAAAGCCATACGATCGCCGCATAATTATGTCTGCGTGGAA 4220478 Query 34558 CCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGT 34617 ||| | |||| | ||||| || || |||||||| | || ||| |||||||| Sbjct 4220477 CCCTAGGGATTTGAAAAGCATGGCCCTACCACCGTGCCATATGTTCGCCCAGTTCTACGT 4220418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262030183520