Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq7 181 2e-40 seq3 163 7e-35 seq2 122 2e-22 >seq7 Length=1956921 Score = 181 bits (200), Expect = 2e-40 Identities = 154/190 (81%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| |||||||| || |||||||| || || | ||||||| |||||| Sbjct 228118 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTCCGGCCATCT 228059 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||| || ||||| || |||||||| || | || ||||||||| Sbjct 228058 TCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 227999 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||||| || ||||||||||| ||| || |||||||||||||| ||| Sbjct 227998 TGAATCTTCGACTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTC 227939 Query 211083 TTTCCCGTGA 211092 || ||||||| Sbjct 227938 TTGCCCGTGA 227929 Score = 158 bits (174), Expect = 3e-33 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || || ||||| || |||||||| ||||| | || || | |||||| Sbjct 228411 AGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCT 228352 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| ||||| || ||||| || || | || ||||||||| Sbjct 228351 TCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 228292 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| || || ||| || |||||||| ||||| ||| Sbjct 228291 TGGATCTTCGACTTAACATTGTCGATAGTATCCGAGGACTCCACCTCGAGGGTGATGGTC 228232 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 ||||| || || ||||| || Sbjct 228231 TTTCCAGTAAGGGTCTTGAC 228212 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || || ||||| || |||||||| || || ||||| | || || Sbjct 228639 AGAACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCC 228580 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || ||||| || ||||| || || ||||| | || ||||||||| Sbjct 228579 TCGAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGATCGGGAGGGATGCCCTCCTTGTCC 228520 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||| ||| | ||| ||||| || ||||||||| Sbjct 228519 TGGATCTTCGACTTGACGTTGTCGATGGTATCACTGGATTCCACCTCCAGCGTGATCGTC 228460 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 228459 TTCCCGGTCAGCGTCTTGACGAAGATCTGCAT 228428 Score = 123 bits (136), Expect = 6e-23 Identities = 157/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || ||| ||| || ||||| || || || || || | || || Sbjct 228867 AGGACGAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCGTCC 228808 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| || || || ||||| || |||| || ||||||||| Sbjct 228807 TCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 228748 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 || ||||| || || || |||||||| || ||| ||| ||||| | |||||| Sbjct 228747 TGAATCTTCGACTTGACATTGTCGATGGTATC---GCTCGATTCCACCTCCAACGTGATC 228691 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || | ||||| ||||| | |||||| Sbjct 228690 GTCTTGCCGGTCAACGTCTTGACAAAGATCTGCAT 228656 >seq3 Length=4560853 Score = 163 bits (180), Expect = 7e-35 Identities = 165/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||| ||| || |||||||| || || ||||| | ||||| Sbjct 1026359 AGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 1026300 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| || ||||| || || | || ||||||||| Sbjct 1026299 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 1026240 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| || || ||||| || ||||||||| Sbjct 1026239 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 1026180 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || |||||||| ||||| || || | |||||| || Sbjct 1026179 TTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1026145 >seq2 Length=4704548 Score = 122 bits (134), Expect = 2e-22 Identities = 141/189 (75%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | ||||| | ||||| || ||||||||||| |||||||| Sbjct 2063068 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 2063009 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || || || || || || | || ||||||||||||||||| || || || ||| Sbjct 2063008 AATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2062949 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAAC 211106 || ||||| ||| || ||||| || ||||| ||||| ||||| || ||||| || | Sbjct 2062948 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA-- 2062891 Query 211107 ACCTGCATT 211115 | ||||||| Sbjct 2062890 AACTGCATT 2062882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151019792090