Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq7 127 2e-24
seq3 93.3 4e-14
>seq7
Length=1956921
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || |||||||| || || ||||| || ||| || || || |||| || |||||
Sbjct 228858 TGGAGGGTGCTCTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCGTCCTCCAGCTGC 228799
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| ||||| || |||||||||||||| | ||| | || ||| |||||| || |||
Sbjct 228798 TTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTC 228739
Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261
|||| | | | ||||||||||| ||||| |||| |||||| | || || |||
Sbjct 228738 GACTTGACATTGTCGATGGTATCGCTCGATTCCACCTCCAACGTGATCGTCTTGCCGGTC 228679
Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284
| ||| || |||||||| |||||
Sbjct 228678 AACGTCTTGACAAAGATCTGCAT 228656
>seq3
Length=4560853
Score = 93.3 bits (102), Expect = 4e-14
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128
||| | ||||| || || |||||||| || || || || || ||| || || || |
Sbjct 1026363 GCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCC 1026304
Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188
|| || ||||| ||||| || || || || ||||||||||| | ||| | || ||| ||
Sbjct 1026303 ATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTT 1026244
Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247
|||| ||| || |||| ||| | | | || ||| |||||||| || | ||||
Sbjct 1026243 GTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGA 1026185
Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287
| | || ||||| || || || || || || ||||||||
Sbjct 1026184 TCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1026145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429545254484258
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |