Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq7 150 4e-31 seq3 122 2e-22 seq2 118 3e-21 >seq7 Length=1956921 Score = 150 bits (166), Expect = 4e-31 Identities = 152/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||||||||||||||| || || || || |||| |||||||||| | ||| Sbjct 228421 ACGGAGACGCAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGAGAGAGT 228362 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||||||| || |||||||| || || || ||||||||||| || || Sbjct 228361 GCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCC 228302 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||| || || |||| ||||| || | Sbjct 228301 CTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATAGTATCCGAGGACTCCACCTCGAG 228242 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||| || || Sbjct 228241 GGTGATGGTCTTTCCAGT 228224 Score = 140 bits (154), Expect = 8e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| ||| || || |||| |||||| ||| || ||| | || || Sbjct 228867 AGGACGAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCGTCC 228808 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || || || ||||| || ||||| || |||||||| Sbjct 228807 TCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 228748 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| |||||||| || | |||||| || |||||||||||| Sbjct 228747 TGAATCTTCGACTTGACATTGTCGATGGTATCGCTCGATTCCACCTCCAACGTGATCGTC 228688 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| ||||| || || Sbjct 228687 TTGCCGGTCAACGTCTT 228671 Score = 136 bits (150), Expect = 9e-27 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || ||||| || || |||| ||||| |||| | || | |||||| Sbjct 228118 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTCCGGCCATCT 228059 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||| || || || || ||||| ||||| || || |||||||| Sbjct 228058 TCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 227999 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||||| ||||||||||| |||| || || || | ||||| ||| Sbjct 227998 TGAATCTTCGACTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTC 227939 Query 225682 TTGCCCGT 225689 |||||||| Sbjct 227938 TTGCCCGT 227931 Score = 111 bits (122), Expect = 4e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || || || || || || || || |||| ||||| ||| | || Sbjct 228648 CGCAGGCGCAGAACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTG 228589 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| || || ||||| || ||||| || ||||| || || || Sbjct 228588 CGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGATCGGGAGGGATGCCC 228529 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||| ||| || |||||||| || || |||||| || | | Sbjct 228528 TCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCACTGGATTCCACCTCCAGC 228469 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||| || |||| || || | ||| | ||||| Sbjct 228468 GTGATCGTCTTCCCGGTCAGCGTCTTGACGAAGATCTGCAT 228428 >seq3 Length=4560853 Score = 122 bits (134), Expect = 2e-22 Identities = 162/225 (72%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| || ||| || || |||| ||||| ||| || || Sbjct 1026369 ACGGAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGT 1026310 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || ||||| || || || || Sbjct 1026309 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCC 1026250 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || ||||||||||| || | ||||| || | Sbjct 1026249 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAG 1026190 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||||||||| ||||| | || || | ||| | ||||| || Sbjct 1026189 GGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1026145 >seq2 Length=4704548 Score = 118 bits (130), Expect = 3e-21 Identities = 141/189 (75%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| |||| || |||| ||||| || |||||||| || |||||||| Sbjct 2063068 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 2063009 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | ||| || || || || || || || |||||||| |||||||| ||| ||| ||| Sbjct 2063008 AATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2062949 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAAC 225705 || ||||| |||| || || || | ||||| ||||||||||||| || || | ||| Sbjct 2062948 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA- 2062890 Query 225706 ACTTGCATT 225714 || |||||| Sbjct 2062889 AC-TGCATT 2062882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530191565804