Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq7 150 4e-31
seq3 122 2e-22
seq2 118 3e-21
>seq7
Length=1956921
Score = 150 bits (166), Expect = 4e-31
Identities = 152/198 (77%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | ||||||||||||||| || || || || |||| |||||||||| | |||
Sbjct 228421 ACGGAGACGCAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGAGAGAGT 228362
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| |||||||| || |||||||| || || || ||||||||||| || ||
Sbjct 228361 GCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCC 228302
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| ||| ||||| || || |||| ||||| || |
Sbjct 228301 CTCCTTGTCCTGGATCTTCGACTTAACATTGTCGATAGTATCCGAGGACTCCACCTCGAG 228242
Query 225672 CGTGATCGTCTTGCCCGT 225689
||||| ||||| || ||
Sbjct 228241 GGTGATGGTCTTTCCAGT 228224
Score = 140 bits (154), Expect = 8e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| |||||||| ||| || || |||| |||||| ||| || ||| | || ||
Sbjct 228867 AGGACGAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAGTCGCTCAGAGTGCGACCGTCC 228808
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||| ||||| || || || ||||| || ||||| || ||||||||
Sbjct 228807 TCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 228748
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| ||| |||||||| || | |||||| || ||||||||||||
Sbjct 228747 TGAATCTTCGACTTGACATTGTCGATGGTATCGCTCGATTCCACCTCCAACGTGATCGTC 228688
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| ||||| || ||
Sbjct 228687 TTGCCGGTCAACGTCTT 228671
Score = 136 bits (150), Expect = 9e-27
Identities = 143/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || ||||| || || |||| ||||| |||| | || | ||||||
Sbjct 228118 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTCCGGCCATCT 228059
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || ||||| || || || || ||||| ||||| || || ||||||||
Sbjct 228058 TCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 227999
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||||||| ||||||||||| |||| || || || | ||||| |||
Sbjct 227998 TGAATCTTCGACTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTC 227939
Query 225682 TTGCCCGT 225689
||||||||
Sbjct 227938 TTGCCCGT 227931
Score = 111 bits (122), Expect = 4e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| || | ||| || || || || || || || || |||| ||||| ||| | ||
Sbjct 228648 CGCAGGCGCAGAACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTG 228589
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| || || || |||||||| || || ||||| || ||||| || ||||| || || ||
Sbjct 228588 CGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGATCGGGAGGGATGCCC 228529
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| ||| || |||||||| || || |||||| || | |
Sbjct 228528 TCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCACTGGATTCCACCTCCAGC 228469
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||||||||| || |||| || || | ||| | |||||
Sbjct 228468 GTGATCGTCTTCCCGGTCAGCGTCTTGACGAAGATCTGCAT 228428
>seq3
Length=4560853
Score = 122 bits (134), Expect = 2e-22
Identities = 162/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | ||| || ||||| || ||| || || |||| ||||| ||| || ||
Sbjct 1026369 ACGGAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGT 1026310
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| || |||||||| || || || ||||| || || || ||
Sbjct 1026309 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCC 1026250
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| || ||||||||||| || | ||||| || |
Sbjct 1026249 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAG 1026190
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||||||||| ||||| | || || | ||| | ||||| ||
Sbjct 1026189 GGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1026145
>seq2
Length=4704548
Score = 118 bits (130), Expect = 3e-21
Identities = 141/189 (75%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| |||| || |||| ||||| || |||||||| || ||||||||
Sbjct 2063068 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 2063009
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
| ||| || || || || || || || |||||||| |||||||| ||| ||| |||
Sbjct 2063008 AATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2062949
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAAC 225705
|| ||||| |||| || || || | ||||| ||||||||||||| || || | |||
Sbjct 2062948 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA- 2062890
Query 225706 ACTTGCATT 225714
|| ||||||
Sbjct 2062889 AC-TGCATT 2062882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530191565804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |