Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq7 113 1e-19
seq3 105 2e-17
seq2 95.1 3e-14
>seq7
Length=1956921
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| || ||||| || ||||| || ||||||||||| |||| | || |
Sbjct 228125 GAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTCCG 228066
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|||||||| || || |||||||| || || | ||||||||| | || ||| || ||
Sbjct 228065 GCCATCTTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTC 228006
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || ||||| || || ||| | || | | |||| || ||| || || |||||
Sbjct 228005 CTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGAGT 227946
Query 152066 AATAGTTTTGCCCGTGA 152082
|| || ||||||||||
Sbjct 227945 GATGGTCTTGCCCGTGA 227929
Score = 105 bits (116), Expect = 2e-17
Identities = 147/204 (72%), Gaps = 4/204 (2%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|||||||| || || || ||||| || |||||||||||||||| | ||| | ||||||
Sbjct 228411 AGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCT 228352
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || ||||| ||||||||||| || | ||||||||| | || ||| || ||||| |
Sbjct 228351 TCGAGCTGCTTT--CCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGT 228294
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
| || || || || ||| | || | | || || ||| || || || || || |
Sbjct 228293 CCTGGATCTTCGACTTAACATTGTCGATAGTATCCGAGGACTCCACCTCGAGGGTGATGG 228234
Query 152071 TTTTGCCCGTGAGAGTCTTCACGA 152094
| || || || || ||||| ||||
Sbjct 228233 TCTTTCCAGTAAGGGTCTTGACGA 228210
>seq3
Length=4560853
Score = 105 bits (116), Expect = 2e-17
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972
||| || ||||||||||| ||| | || | ||||| || || || ||||||||
Sbjct 1026339 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 1026280
Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032
||| || | ||||||||||| | ||| || ||||| || || || || ||||| |
Sbjct 1026279 GATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 1026220
Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092
|| | | |||| ||| ||| || ||||| || || || || |||||||| ||||| ||
Sbjct 1026219 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGAC 1026160
Query 152093 GAAGACCTGCATTTTACC 152110
||| | |||||| || ||
Sbjct 1026159 GAAAATCTGCATCTTGCC 1026142
>seq2
Length=4704548
Score = 95.1 bits (104), Expect = 3e-14
Identities = 135/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|| ||||||||||| |||| | |||| ||||| || || || |||||||||||
Sbjct 2063068 TTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 2063009
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
| | |||||| |||| | ||| || ||||| || || || || |||||| | ||
Sbjct 2063008 AATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 2062949
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096
| |||| || ||| || ||||| || || || |||||||| || ||||||||||
Sbjct 2062948 ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA-- 2062891
Query 152097 ACCTGCATT 152105
| |||||||
Sbjct 2062890 AACTGCATT 2062882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153819824300286
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |