Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq7 161 2e-34 seq3 156 1e-32 seq2 136 1e-26 >seq7 Length=1956921 Score = 161 bits (178), Expect = 2e-34 Identities = 155/199 (78%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || ||||| || ||||||||||||||||| ||| || || |||| Sbjct 228210 TCGTCAAGACCCTTACTGGAAAGACCATCACCCTCGAGGTGGAGTCCTCGGATACTATCG 228269 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || || || ||||| |||||||| || || ||||| || |||||||| || || | Sbjct 228270 ACAATGTTAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTGA 228329 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||||||||||| |||||||||||||| | ||||| ||||||| ||| |||| || | Sbjct 228330 TCTTCGCCGGAAAGCAGCTCGAAGATGGCCGCACTCTCTCCGATTACAACATCCAGAAGG 228389 Query 178111 AATCAACACTGCATCTTGT 178129 | || || || || ||||| Sbjct 228390 AGTCGACGCTCCACCTTGT 228408 Score = 140 bits (154), Expect = 8e-28 Identities = 143/187 (76%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || ||||| |||||||| || ||| ||||||||||| || || || Sbjct 227929 TCACGGGCAAGACCATCACTCTCGAGGTCGAGTCCTCCGACACCATCGACAATGTGAAGT 227988 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 |||||||||||||| || || ||||| || |||||||| || || || |||||||| | Sbjct 227989 CGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCCTGATTTTCGCCGGCA 228048 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | |||||||||||||| |||| || |||| || ||| |||| || || || || || | Sbjct 228049 AGCAGCTCGAAGATGGCCGGACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTTC 228108 Query 178123 ATCTTGT 178129 | || || Sbjct 228109 ACCTCGT 228115 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/191 (72%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || || || || || | || || || |||||||| | ||||||||| ||| Sbjct 228659 CAGATCTTTGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGAGC--- 228715 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 || |||||||| || ||||| |||||||||||||| || || || || ||||||||| Sbjct 228716 GATACCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 228775 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || ||||| || || || ||||| || || || | ||||| ||| || || Sbjct 228776 CAGCGTCTCATCTTTGCTGGCAAGCAGCTGGAGGACGGTCGCACTCTGAGCGACTACAAT 228835 Query 178101 GTCCAAAAAGA 178111 |||| || || Sbjct 228836 ATCCAGAAGGA 228846 >seq3 Length=4560853 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || ||||||||||| |||||||| || ||| Sbjct 1026151 CAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 1026210 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || ||||| ||||||||||| Sbjct 1026211 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 1026270 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| ||||| | || || ||| || ||| || Sbjct 1026271 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATC 1026330 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| || || Sbjct 1026331 CAGAAGGAGAGCACCCTGCACCTGGT 1026356 >seq2 Length=4704548 Score = 136 bits (150), Expect = 1e-26 Identities = 138/180 (77%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||||||||| || || || || || || |||||||| ||||| || ||| ||||| || Sbjct 2062889 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACGAT 2062948 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| || ||||| ||||| |||||||| || || ||||| ||||| ||||| ||| | Sbjct 2062949 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGATCAGCAGCGATT 2063008 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||||||||| || |||||||| ||||| | || || |||| || ||| |||| || Sbjct 2063009 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGAACCCTGTCCGACTACAACATCCAGAA 2063068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730182094804