Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03- 01] 66 sequences; 31,390,562 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq3 185 8e-42 seq7 161 9e-35 seq2 122 8e-23 seq1 82.4 7e-11 >seq3 Length=4560853 Score = 185 bits (204), Expect = 8e-42 Identities = 183/234 (78%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || || || | |||||| ||||| |||||||||||||| ||||| |||||| Sbjct 1026377 CCACCACCACGGAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCG 1026318 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 |||||||| | || |||||||||||||||||||| ||||||||||| ||||||| | Sbjct 1026317 CTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGG 1026258 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811 || | || |||||||||| ||| || ||| ||| | | | |||||| ||||| Sbjct 1026257 GGGATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACTC 1026199 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||||| | || ||||| || ||||| || ||||| |||||||||||||| || Sbjct 1026198 CACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1026145 >seq7 Length=1956921 Score = 161 bits (178), Expect = 9e-35 Identities = 177/231 (77%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| || || | || || || || |||||||||||||| || || |||||| Sbjct 228883 GCCGCCGCGCAGGCGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAGTCGCT 228824 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| |||| || ||||||||||| || || || || ||||| ||||||| ||| Sbjct 228823 CAGAGTGCGACCGTCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGG 228764 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTC 41811 || || |||||||||| ||| | || | ||| || | || | || |||||||| || Sbjct 228763 AATGCCCTCCTTGTCC-TGAATCTTCGACTTGACATTGTCG--ATGGTATCGCTCGATTC 228707 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| ||| ||||| || || |||| |||||| || || |||||||| Sbjct 228706 CACCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACAAAGATCTGCAT 228656 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | ||||||||||| || ||||||||| ||||| |||||| | Sbjct 228654 CCACCGCGCAGGCGCAGAACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTG 228595 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| ||||||||||| ||||| || || || || || || || | || Sbjct 228594 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGATCGGGAGGG 228535 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | || || || || ||||| Sbjct 228534 ATGCCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATGGTATCACTGGATTCCAC 228476 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||| ||||| || || ||||||||||| ||||| |||||||| Sbjct 228475 CTCCAGCGTGATCGTCTTCCCGGTCAGCGTCTTGACGAAGATCTGCAT 228428 Score = 132 bits (146), Expect = 4e-26 Identities = 156/206 (76%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | || || || || ||| ||||||||| ||||| |||||||| Sbjct 228134 GCCACCGCGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 228075 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||| || | || |||||||||||||||||||| ||||||||||| ||||| | || Sbjct 228074 GAGGGTCCGGCCATCTTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGCGG 228015 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | || |||||||||| ||| | || | |||| || | | | |||||| ||||| Sbjct 228014 GATGCCCTCCTTGTCC-TGAATCTTCGACTTC-ACATTGTCGATGGTGTCGGAGGACTCG 227957 Query 41813 ACCTCCACCGTTATCGTTTTACCCGT 41838 ||||| | || || || || ||||| Sbjct 227956 ACCTCGAGAGTGATGGTCTTGCCCGT 227931 Score = 125 bits (138), Expect = 7e-24 Identities = 160/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || ||||| ||||||||| ||||| || |||||| Sbjct 228426 CCACCACGGAGACGCAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGAG 228367 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || ||||||||||| |||||||| ||||||||||| ||||| | || Sbjct 228366 AGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 228307 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | ||| || |||||||| Sbjct 228306 ATGCCCTCCTTGTCCTGGATCTTCGACTT-AACATTGTCGATAGTATCCGAGGACTCCAC 228248 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||| | || || || || || || || ||||| |||| Sbjct 228247 CTCGAGGGTGATGGTCTTTCCAGTAAGGGTCTTGACGA 228210 >seq2 Length=4704548 Score = 122 bits (134), Expect = 8e-23 Identities = 144/192 (75%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||||| ||||| || | || |||||||||||||||||||| | Sbjct 2063070 CCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 2063011 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 ||| ||||| || |||| ||| | || |||||||||| ||| || ||| || | Sbjct 2063010 TCAATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 2062951 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | ||||| ||||| ||||| | || || || || |||||||| ||||| || Sbjct 2062950 CG--ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 2062893 Query 41851 GAAAATCTGCAT 41862 |||| |||||| Sbjct 2062892 GAAA--CTGCAT 2062883 >seq1 Length=5152962 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 85804 TCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTCATCG 85863 |||| || ||||| ||||||||| |||| || |||||| || || || ||||||| Sbjct 3112488 TCGCGCCCCGTTCGGGCCTCGCCTCCAAGAACTTCATCGACACCGGTGCTGGCGTCATCG 3112547 Query 85864 ACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGAA 85913 |||||||||||||||| ||| || | ||||||||||||| |||| Sbjct 3112548 ACGCCGACTACCGCGGCCCGCTCAAGGTCCTGCTCTTCAACCACGCCGAA 3112597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303618599200