Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Albophoma_20yamanashiensis_20[genbank_20GCA_5F001600555.1_202016-03-
01] 66 sequences; 31,390,562 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq3 185 8e-42
seq7 161 9e-35
seq2 122 8e-23
seq1 82.4 7e-11
>seq3
Length=4560853
Score = 185 bits (204), Expect = 8e-42
Identities = 183/234 (78%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692
|| || || || || || | |||||| ||||| |||||||||||||| ||||| ||||||
Sbjct 1026377 CCACCACCACGGAGGCGCAGCACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCG 1026318
Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752
|||||||| | || |||||||||||||||||||| ||||||||||| ||||||| |
Sbjct 1026317 CTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGG 1026258
Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811
|| | || |||||||||| ||| || ||| ||| | | | |||||| |||||
Sbjct 1026257 GGGATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACTC 1026199
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||||| | || ||||| || ||||| || ||||| |||||||||||||| ||
Sbjct 1026198 CACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1026145
>seq7
Length=1956921
Score = 161 bits (178), Expect = 9e-35
Identities = 177/231 (77%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||||||||| || || | || || || || |||||||||||||| || || ||||||
Sbjct 228883 GCCGCCGCGCAGGCGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATATTGTAGTCGCT 228824
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| ||||| |||| || ||||||||||| || || || || ||||| ||||||| |||
Sbjct 228823 CAGAGTGCGACCGTCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGG 228764
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTC 41811
|| || |||||||||| ||| | || | ||| || | || | || |||||||| ||
Sbjct 228763 AATGCCCTCCTTGTCC-TGAATCTTCGACTTGACATTGTCG--ATGGTATCGCTCGATTC 228707
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||||| ||| ||||| || || |||| |||||| || || ||||||||
Sbjct 228706 CACCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACAAAGATCTGCAT 228656
Score = 152 bits (168), Expect = 5e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| || || | ||||||||||| || ||||||||| ||||| |||||| |
Sbjct 228654 CCACCGCGCAGGCGCAGAACCAGATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTG 228595
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| ||||||||||| ||||| || || || || || || || | ||
Sbjct 228594 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGATCGGGAGGG 228535
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| || ||| ||| | | | || || || || |||||
Sbjct 228534 ATGCCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATGGTATCACTGGATTCCAC 228476
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| ||| ||||| || || ||||||||||| ||||| ||||||||
Sbjct 228475 CTCCAGCGTGATCGTCTTCCCGGTCAGCGTCTTGACGAAGATCTGCAT 228428
Score = 132 bits (146), Expect = 4e-26
Identities = 156/206 (76%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| ||||| ||||| | || || || || ||| ||||||||| ||||| ||||||||
Sbjct 228134 GCCACCGCGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 228075
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||| || | || |||||||||||||||||||| ||||||||||| ||||| | ||
Sbjct 228074 GAGGGTCCGGCCATCTTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGCGG 228015
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812
| || |||||||||| ||| | || | |||| || | | | |||||| |||||
Sbjct 228014 GATGCCCTCCTTGTCC-TGAATCTTCGACTTC-ACATTGTCGATGGTGTCGGAGGACTCG 227957
Query 41813 ACCTCCACCGTTATCGTTTTACCCGT 41838
||||| | || || || || |||||
Sbjct 227956 ACCTCGAGAGTGATGGTCTTGCCCGT 227931
Score = 125 bits (138), Expect = 7e-24
Identities = 160/218 (73%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || ||||| ||||||||| ||||| || ||||||
Sbjct 228426 CCACCACGGAGACGCAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGAG 228367
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || ||||||||||| |||||||| ||||||||||| ||||| | ||
Sbjct 228366 AGAGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 228307
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| || ||| ||| | | | ||| || ||||||||
Sbjct 228306 ATGCCCTCCTTGTCCTGGATCTTCGACTT-AACATTGTCGATAGTATCCGAGGACTCCAC 228248
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852
||| | || || || || || || || ||||| ||||
Sbjct 228247 CTCGAGGGTGATGGTCTTTCCAGTAAGGGTCTTGACGA 228210
>seq2
Length=4704548
Score = 122 bits (134), Expect = 8e-23
Identities = 144/192 (75%), Gaps = 6/192 (3%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||||| ||||| || | || |||||||||||||||||||| |
Sbjct 2063070 CCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 2063011
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790
||| ||||| || |||| ||| | || |||||||||| ||| || ||| || |
Sbjct 2063010 TCAATCGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 2062951
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
|| | ||||| ||||| ||||| | || || || || |||||||| ||||| ||
Sbjct 2062950 CG--ATCGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 2062893
Query 41851 GAAAATCTGCAT 41862
|||| ||||||
Sbjct 2062892 GAAA--CTGCAT 2062883
>seq1
Length=5152962
Score = 82.4 bits (90), Expect = 7e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 85804 TCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTCATCG 85863
|||| || ||||| ||||||||| |||| || |||||| || || || |||||||
Sbjct 3112488 TCGCGCCCCGTTCGGGCCTCGCCTCCAAGAACTTCATCGACACCGGTGCTGGCGTCATCG 3112547
Query 85864 ACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGAA 85913
|||||||||||||||| ||| || | ||||||||||||| ||||
Sbjct 3112548 ACGCCGACTACCGCGGCCCGCTCAAGGTCCTGCTCTTCAACCACGCCGAA 3112597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303618599200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |