Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13] 27 sequences; 33,499,641 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq23 98.7 9e-16 >seq23 Length=2828041 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||| | || || |||||||| | ||| || ||| | ||| | || || Sbjct 925704 CACCAAGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCTTC 925645 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || ||| |||||| | ||||| | | || || || ||||||||||| || ||||| | Sbjct 925644 CAACTGCTTTCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCTTG 925585 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG-GTCGACGTCAATCGTGATGGTTT 94976 || || | ||||||| | | | |||||| || || || || || | ||||||||| | Sbjct 925584 GATCTTCGACTTGACGTTGTCAATAGTGTC-GCTTGATTCCACCTCGAGCGTGATGGTCT 925526 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| || || || || ||||| ||||| Sbjct 925525 TGCCAGTCAGGGTCTTGACGAAGATTTGCAT 925495 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCC 94855 ||||||||| | |||||| ||||| || | ||| || || | | || ||| | || Sbjct 925932 CACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTC--TGAGAGCGTTCGGCCGTCT 925875 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||||||| || || | || || | | ||||| || ||||| ||||| || ||||| Sbjct 925874 TCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 925815 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGGT 94974 | || || | ||| || | ||| ||||| || | ||||| || | || ||||| Sbjct 925814 TGGATCTTGGACTTTACATTGTCGATCGTGTC-GCTAGACTCGACTTCCAATGTAATGGT 925756 Query 94975 TTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| |||||||| || |||||||||||||| Sbjct 925755 CTTTCCGGTAAGAGTCTTGACAAAGATCTGCAT 925723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291048701720