Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13]
27 sequences; 33,499,641 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq21 107 2e-18
>seq21
Length=3333843
Score = 107 bits (118), Expect = 2e-18
Identities = 164/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701
|| ||| ||||| || || || || || || || ||||| || | ||||| ||||| |
Sbjct 2203343 CTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTACCAGCCAGAGAAATGTTCTC 2203402
Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761
||| || ||||| || || | | || | | |||| ||| ||| | | |||| |||
Sbjct 2203403 CATGAAGTCGAAGGGGTTGGTGGCGTGGTAGACCTTGACGTTGCCGAGGGCCAACAGCAG 2203462
Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GA-TTGCGAATTCATGCCCAACATA 119819
|| || || || ||||||||||||| ||||||| || | ||| |||||||| | || |
Sbjct 2203463 ACGGTCAGCGACGAACTCGATGTATTGGCACATGAGAGTAGCG--TTCATGCCGAGCAGA 2203520
Query 119820 GCGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869
||| |||| || | | | ||||| |||| ||||| ||||| |||||
Sbjct 2203521 GCGCATGGTAGTGCGTCGCTCAAGAACTCCTGCTCAATCTCGACGGCTTC 2203570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662238451440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |