Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13] 27 sequences; 33,499,641 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq21 123 5e-23 >seq21 Length=3333843 Score = 123 bits (136), Expect = 5e-23 Identities = 293/438 (67%), Gaps = 6/438 (1%) Strand=Plus/Minus Query 243319 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGT 243378 ||||| ||||| | || ||| |||| | ||||||| ||||| ||| ||| Sbjct 2203762 GTTGAGGGTATCTTCTTCAGCGGTTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 2203703 Query 243379 GTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAA 243438 ||||||| || || | || |||||| ||||| || ||||||||| | ||| Sbjct 2203702 CTGATGCCCGGTCTAACATTCTCCAACGAGCTCATCTCCCGTGACGAGGGCATGCACACC 2203643 Query 243439 CAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAAA--CGGTCA 243496 | |||| ||| | | || ||| ||||||||| ||| | | | | |||| Sbjct 2203642 GACTTCGCCTGCCTTCTCTTCTCTCTCCTCGAGAACAAGC--CCAGCCCAGAGTCTGTCA 2203585 Query 243497 AACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCAT 243556 | |||||||| ||||| || || | || |||| ||| | ||||||| | |||| Sbjct 2203584 GAGCTATCATCACTGAAGCCGTCGAGATTGAGCAGGAGTTCTTGAGCGACGCACTACCAT 2203525 Query 243557 GCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACC 243616 || || | ||||||||| || |||||| | || |||||||| ||||| || |||| Sbjct 2203524 GCGCTCTGCTCGGCATGAACGCTACTCTCATGTGCCAATACATCGAGTTCGTCGCTGACC 2203465 Query 243617 GCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTA 243676 | | | | || || || | | || || ||| || ||| |||||||| | ||| | Sbjct 2203464 GTCTGCTGTTGGCCCTCGGCAACGTCAAGGTCTACCACGCCACCAACCCCTTCGACTTCA 2203405 Query 243677 TGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATC 243736 ||||| |||||| || || || || ||||||||||| ||||| ||| | || || | Sbjct 2203404 TGGAGAACATTTCTCTGGCTGGTAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTACC 2203345 Query 243737 A-ACGCCCTGGTGTGATG 243753 | | | || ||||| ||| Sbjct 2203344 AGAAGGCC-GGTGTCATG 2203328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879618472450