Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13]
27 sequences; 33,499,641 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq21 123 5e-23
>seq21
Length=3333843
Score = 123 bits (136), Expect = 5e-23
Identities = 293/438 (67%), Gaps = 6/438 (1%)
Strand=Plus/Minus
Query 243319 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGT 243378
||||| ||||| | || ||| |||| | ||||||| ||||| ||| |||
Sbjct 2203762 GTTGAGGGTATCTTCTTCAGCGGTTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 2203703
Query 243379 GTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAA 243438
||||||| || || | || |||||| ||||| || ||||||||| | |||
Sbjct 2203702 CTGATGCCCGGTCTAACATTCTCCAACGAGCTCATCTCCCGTGACGAGGGCATGCACACC 2203643
Query 243439 CAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAAA--CGGTCA 243496
| |||| ||| | | || ||| ||||||||| ||| | | | | ||||
Sbjct 2203642 GACTTCGCCTGCCTTCTCTTCTCTCTCCTCGAGAACAAGC--CCAGCCCAGAGTCTGTCA 2203585
Query 243497 AACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCAT 243556
| |||||||| ||||| || || | || |||| ||| | ||||||| | ||||
Sbjct 2203584 GAGCTATCATCACTGAAGCCGTCGAGATTGAGCAGGAGTTCTTGAGCGACGCACTACCAT 2203525
Query 243557 GCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACC 243616
|| || | ||||||||| || |||||| | || |||||||| ||||| || ||||
Sbjct 2203524 GCGCTCTGCTCGGCATGAACGCTACTCTCATGTGCCAATACATCGAGTTCGTCGCTGACC 2203465
Query 243617 GCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTA 243676
| | | | || || || | | || || ||| || ||| |||||||| | ||| |
Sbjct 2203464 GTCTGCTGTTGGCCCTCGGCAACGTCAAGGTCTACCACGCCACCAACCCCTTCGACTTCA 2203405
Query 243677 TGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATC 243736
||||| |||||| || || || || ||||||||||| ||||| ||| | || || |
Sbjct 2203404 TGGAGAACATTTCTCTGGCTGGTAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTACC 2203345
Query 243737 A-ACGCCCTGGTGTGATG 243753
| | | || ||||| |||
Sbjct 2203344 AGAAGGCC-GGTGTCATG 2203328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879618472450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |