Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13]
27 sequences; 33,499,641 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq21 226 3e-54
>seq21
Length=3333843
Score = 226 bits (250), Expect = 3e-54
Identities = 913/1426 (64%), Gaps = 19/1426 (1%)
Strand=Plus/Plus
Query 113903 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 113962
|||||||| |||||||| |||||| || | |||||| |||| |||||||||
Sbjct 606881 TTGACAACCTGGAACTCACCAGCGAGGACACGGCGGGAATAGATGTTGGAGGTGTATGGC 606940
Query 113963 TCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATG 114022
|| |||||||| ||||| |||| || || | |||||||| || ||||||||||| |||
Sbjct 606941 TCGAAGCACTCGTTGTTGCCCAGAATCTGTGAAGTGGAGGCAGTTGGCATGGGTGCAATG 607000
Query 114023 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGT--CGT 114080
|| || ||| || | ||| | || ||| ||||| || | |||||| |
Sbjct 607001 AGCAGCGAGTTGCGTACACCGTGCTCAGCAATCTTCTCCTTCAGAGACGCCCAGTCCCAG 607060
Query 114081 AGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCG 114140
|| | || | || | | | ||||||||| ||||||||||||| ||||| | || |
Sbjct 607061 AGGTCAG-TAGGTGT-GACATTCCACATATCGTACTGGAGGATACCCTGGGATACGGGAG 607118
Query 114141 ATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGG 114200
|||| || | |||| ||| ||||| ||| || | ||| | | ||| |
Sbjct 607119 ATCCTTCGTAGGTCTTGTAAGGGCCAAGTTCCTTTGCGATGTCGCATGAGGAAGTGAGAG 607178
Query 114201 CTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAA 114260
| || || || || ||||| || || | || | ||| || ||||| || || |
Sbjct 607179 CAGCATGGTAGATGGTCTCGAAGATTTGGATGTTGAGCTTCTTAGCTTCGTCTGACTCGA 607238
Query 114261 ACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGC 114320
| | || ||| | || |||| || |||||||| ||||| | || || || |
Sbjct 607239 AAGGAAGGCGGAGTGCGAGGAAGGCATCGGCAAGACCTTGAACACCCATACCGATGGGTC 607298
Query 114321 GATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCC 114380
| || | | || || || || || || || || ||||| | |
Sbjct 607299 GGTGGCGGAAGTTGCTGCGGCGTGCCTCTTCGACAGGGTAGTGGTTGACCTCGATGATCT 607358
Query 114381 TATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGC 114440
| || | || |||||| |||| ||||| ||| || ||||| | | | ||||| ||
Sbjct 607359 TGTTCAAGTTGCGGGTGACGACCTGTGTGACTTCGTGGAGCTTCTTGAAGTCAAACACGC 607418
Query 114441 GAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCT 114500
| || | | |||| | ||| ||||| | || |||| || || |||| | ||
Sbjct 607419 CGGCCTTGTAGTCGACAAAAGAAGGCAGGGCAAGAGAAGCCAAGTTGCAAACAGCGACCT 607478
Query 114501 CATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCA 114560
|||| | | |||||||| | ||| || || |||| || || || ||||| || |
Sbjct 607479 CATCAGGAGCGGTGTACTCCACAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCGA 607538
Query 114561 AGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCG 114620
|||||| || || ||| ||| || || |||||||| ||||| | || | || |
Sbjct 607539 GGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATAAAGGGGTTACCAG 607598
Query 114621 TCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGG 114680
|||| || || | || || || || | ||| | | || | ||||| ||
Sbjct 607599 TCTCGGTCTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGTGCGCGAACAGTCTCGCGAC 607658
Query 114681 CTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTG 114740
| || || ||||| | ||| || ||||| || |||||||| | | || |
Sbjct 607659 CCTTGTTCTGCTTTTCGTAGCTCTCGTACAGAGCTTCGAATTCTTCACCGTAGACATCGG 607718
Query 114741 AGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCT 114800
||| || || || | ||||| | || | ||| | || || | |||||||
Sbjct 607719 CGAGGCCAGGGCACTCGTTCGGGCACATCAGTGTCCAGTTGCCGTTGTCTTGGACACGCT 607778
Query 114801 TCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 114860
||||||||||||| || ||||| ||||| |||||||||| ||| ||| | || || |
Sbjct 607779 TCATGAAGAGGTCAGGAATCCACAGAGCGTAGAAGAGATCGCGAGCGCGGACCTCCTCCT 607838
Query 114861 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 114920
|| || || |||| || | || | | || || |||||||| || || ||||
Sbjct 607839 TGCCGTGGTTCTTGCGCAGGTCAAGGAAACCAAAGACGTCAGCGTGCCATGGCTCTAGGT 607898
Query 114921 ACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGG 114974
| | |||| | | ||| |||| ||| |||||| ||||| | || |||
Sbjct 607899 AGATGGCGA-AGGCACCT--GGACGCTTGTTGCCACCCTGGTCGACATAGCGAGCAGTGT 607955
Query 114975 CATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-AT 115032
|| |||| || ||||| ||||||| ||| | |||| || || || || |||| |
Sbjct 607956 TGTTGTATACACGGAGCATGGGAATGAGACCGTTAGATGTTCCGTTAGTGCCACCGATGT 608015
Query 115033 ACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGA 115092
| ||| | | | || | | || | || | |||||||| || || ||| ||
Sbjct 608016 ATGAGCC--AGTAGCACGAATGCGGTGCACGTTGAGGCCAATACCGCCAGCGGTCTTGGA 608073
Query 115093 GATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGC 115152
||| ||| || | |||| || |||| || |||||||| ||| |||| | |
Sbjct 608074 GATCAACGCACAGGTCTTGAGTGTGTCGTAAATGCCGTCGATACTGTCCTCCTTCATGTC 608133
Query 115153 GATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGT 115212
||| |||||||| ||||||||| || |||||| || |||||||| | || || |
Sbjct 608134 GATGAGGAAGCATGACGACATTTGCGGTGATGGTGTGCCCGCGTTGAACAACGTCGGCGA 608193
Query 115213 CGCGTGGATGAACATAC-CTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGT 115271
||||| |||| ||| ||| ||||| | ||||||||||| | | | ||||
Sbjct 608194 GGCGTGTGTGAA-GTACTTTTGAGACATGTAGTCGTAGGTCTCGATGGCTTTCTCGATGT 608252
Query 115272 CTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317
| || |||||||| || | | || ||||| | ||||| ||| ||
Sbjct 608253 CATCACCGTGAATGCCAACAGCAACACGCATGAGCATGTGTTGTGG 608298
Score = 93.3 bits (102), Expect = 5e-14
Identities = 99/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124
|||||||||||||||||||| || || ||||| || || ||||| ||||| ||||||
Sbjct 2203653 CCCTCGTCACGGGAGATGAGCTCGTTGGAGAATGTTAGACCGGGCATCAGACCGCGCTTC 2203712
Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184
|| | |||||| || | || ||||| ||||||||| ||||| ||| |||||
Sbjct 2203713 TTGAGCCAGAAGATGGAGGCGAAAGAACCGCTGAAGAAGATACCCTCAACAGCGGCGAAT 2203772
Query 126185 GCAAAGAGACG 126195
|||| ||| ||
Sbjct 2203773 GCAACGAGGCG 2203783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353398393160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |