Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13] 27 sequences; 33,499,641 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq21 226 3e-54 >seq21 Length=3333843 Score = 226 bits (250), Expect = 3e-54 Identities = 913/1426 (64%), Gaps = 19/1426 (1%) Strand=Plus/Plus Query 113903 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 113962 |||||||| |||||||| |||||| || | |||||| |||| ||||||||| Sbjct 606881 TTGACAACCTGGAACTCACCAGCGAGGACACGGCGGGAATAGATGTTGGAGGTGTATGGC 606940 Query 113963 TCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATG 114022 || |||||||| ||||| |||| || || | |||||||| || ||||||||||| ||| Sbjct 606941 TCGAAGCACTCGTTGTTGCCCAGAATCTGTGAAGTGGAGGCAGTTGGCATGGGTGCAATG 607000 Query 114023 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGT--CGT 114080 || || ||| || | ||| | || ||| ||||| || | |||||| | Sbjct 607001 AGCAGCGAGTTGCGTACACCGTGCTCAGCAATCTTCTCCTTCAGAGACGCCCAGTCCCAG 607060 Query 114081 AGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCG 114140 || | || | || | | | ||||||||| ||||||||||||| ||||| | || | Sbjct 607061 AGGTCAG-TAGGTGT-GACATTCCACATATCGTACTGGAGGATACCCTGGGATACGGGAG 607118 Query 114141 ATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGG 114200 |||| || | |||| ||| ||||| ||| || | ||| | | ||| | Sbjct 607119 ATCCTTCGTAGGTCTTGTAAGGGCCAAGTTCCTTTGCGATGTCGCATGAGGAAGTGAGAG 607178 Query 114201 CTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAA 114260 | || || || || ||||| || || | || | ||| || ||||| || || | Sbjct 607179 CAGCATGGTAGATGGTCTCGAAGATTTGGATGTTGAGCTTCTTAGCTTCGTCTGACTCGA 607238 Query 114261 ACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGC 114320 | | || ||| | || |||| || |||||||| ||||| | || || || | Sbjct 607239 AAGGAAGGCGGAGTGCGAGGAAGGCATCGGCAAGACCTTGAACACCCATACCGATGGGTC 607298 Query 114321 GATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCC 114380 | || | | || || || || || || || || ||||| | | Sbjct 607299 GGTGGCGGAAGTTGCTGCGGCGTGCCTCTTCGACAGGGTAGTGGTTGACCTCGATGATCT 607358 Query 114381 TATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGC 114440 | || | || |||||| |||| ||||| ||| || ||||| | | | ||||| || Sbjct 607359 TGTTCAAGTTGCGGGTGACGACCTGTGTGACTTCGTGGAGCTTCTTGAAGTCAAACACGC 607418 Query 114441 GAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCT 114500 | || | | |||| | ||| ||||| | || |||| || || |||| | || Sbjct 607419 CGGCCTTGTAGTCGACAAAAGAAGGCAGGGCAAGAGAAGCCAAGTTGCAAACAGCGACCT 607478 Query 114501 CATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCA 114560 |||| | | |||||||| | ||| || || |||| || || || ||||| || | Sbjct 607479 CATCAGGAGCGGTGTACTCCACAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCGA 607538 Query 114561 AGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCG 114620 |||||| || || ||| ||| || || |||||||| ||||| | || | || | Sbjct 607539 GGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATAAAGGGGTTACCAG 607598 Query 114621 TCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGG 114680 |||| || || | || || || || | ||| | | || | ||||| || Sbjct 607599 TCTCGGTCTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGTGCGCGAACAGTCTCGCGAC 607658 Query 114681 CTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTG 114740 | || || ||||| | ||| || ||||| || |||||||| | | || | Sbjct 607659 CCTTGTTCTGCTTTTCGTAGCTCTCGTACAGAGCTTCGAATTCTTCACCGTAGACATCGG 607718 Query 114741 AGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCT 114800 ||| || || || | ||||| | || | ||| | || || | ||||||| Sbjct 607719 CGAGGCCAGGGCACTCGTTCGGGCACATCAGTGTCCAGTTGCCGTTGTCTTGGACACGCT 607778 Query 114801 TCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 114860 ||||||||||||| || ||||| ||||| |||||||||| ||| ||| | || || | Sbjct 607779 TCATGAAGAGGTCAGGAATCCACAGAGCGTAGAAGAGATCGCGAGCGCGGACCTCCTCCT 607838 Query 114861 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 114920 || || || |||| || | || | | || || |||||||| || || |||| Sbjct 607839 TGCCGTGGTTCTTGCGCAGGTCAAGGAAACCAAAGACGTCAGCGTGCCATGGCTCTAGGT 607898 Query 114921 ACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGG 114974 | | |||| | | ||| |||| ||| |||||| ||||| | || ||| Sbjct 607899 AGATGGCGA-AGGCACCT--GGACGCTTGTTGCCACCCTGGTCGACATAGCGAGCAGTGT 607955 Query 114975 CATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-AT 115032 || |||| || ||||| ||||||| ||| | |||| || || || || |||| | Sbjct 607956 TGTTGTATACACGGAGCATGGGAATGAGACCGTTAGATGTTCCGTTAGTGCCACCGATGT 608015 Query 115033 ACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGA 115092 | ||| | | | || | | || | || | |||||||| || || ||| || Sbjct 608016 ATGAGCC--AGTAGCACGAATGCGGTGCACGTTGAGGCCAATACCGCCAGCGGTCTTGGA 608073 Query 115093 GATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGC 115152 ||| ||| || | |||| || |||| || |||||||| ||| |||| | | Sbjct 608074 GATCAACGCACAGGTCTTGAGTGTGTCGTAAATGCCGTCGATACTGTCCTCCTTCATGTC 608133 Query 115153 GATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGT 115212 ||| |||||||| ||||||||| || |||||| || |||||||| | || || | Sbjct 608134 GATGAGGAAGCATGACGACATTTGCGGTGATGGTGTGCCCGCGTTGAACAACGTCGGCGA 608193 Query 115213 CGCGTGGATGAACATAC-CTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGT 115271 ||||| |||| ||| ||| ||||| | ||||||||||| | | | |||| Sbjct 608194 GGCGTGTGTGAA-GTACTTTTGAGACATGTAGTCGTAGGTCTCGATGGCTTTCTCGATGT 608252 Query 115272 CTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317 | || |||||||| || | | || ||||| | ||||| ||| || Sbjct 608253 CATCACCGTGAATGCCAACAGCAACACGCATGAGCATGTGTTGTGG 608298 Score = 93.3 bits (102), Expect = 5e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 |||||||||||||||||||| || || ||||| || || ||||| ||||| |||||| Sbjct 2203653 CCCTCGTCACGGGAGATGAGCTCGTTGGAGAATGTTAGACCGGGCATCAGACCGCGCTTC 2203712 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| || | || ||||| ||||||||| ||||| ||| ||||| Sbjct 2203713 TTGAGCCAGAAGATGGAGGCGAAAGAACCGCTGAAGAAGATACCCTCAACAGCGGCGAAT 2203772 Query 126185 GCAAAGAGACG 126195 |||| ||| || Sbjct 2203773 GCAACGAGGCG 2203783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353398393160