Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13]
27 sequences; 33,499,641 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq21 210 3e-49
>seq21
Length=3333843
Score = 210 bits (232), Expect = 3e-49
Identities = 1104/1743 (63%), Gaps = 41/1743 (2%)
Strand=Plus/Plus
Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617
||||| |||||||| || ||||| || || ||||||| || | ||||| || |
Sbjct 606575 CGGAGATAGTACATGCCAGTCTTCAGACCAGCCTTCCAGCCAGCAAAGTGCATAGAAGTG 606634
Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677
| |||| | || || | |||| || ||| | || || || || |||||
Sbjct 606635 ATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTTAGCGACTGAGACTGGTCAATGAAA 606694
Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCAT--CTTGATTTCCCACACAGTTC 115735
|| || || || ||||| ||||| | |||||| | ||| ||||| || ||
Sbjct 606695 GCACCACGGTCAGCGGCCATCTCAATGA--TCCTTCGCTGCGAGATCTCCCAGACGGTCT 606752
Query 115736 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGG--ATAGAGCCACCTGC 115793
|||| || |||| | || || ||||| | || || ||| ||||| |||| |
Sbjct 606753 TGTAAAGAGTCTTTGTCTCCTCAGGGATGTTGG-GA-ATCCTGGCAATAGA---ACCTCC 606807
Query 115794 CTTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCT- 115849
| | | |||| | | |||||| | || ||||| ||||| || | || ||||
Sbjct 606808 ATCGGCGATGATACGGTTCTTCATGTTCTCAGACCACAGACCCATGTCGACAAGGTCCTT 606867
Query 115850 ---CCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGA 115906
| || | | | |||||||| |||||||| |||||| || | |||||
Sbjct 606868 GAGCAACCATGGG----TTGACAACCTGGAACTCACCAGCGAGGACACGGCGGGAATAGA 606923
Query 115907 TGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTG 115966
|||||| ||||||||||| |||||||| ||||| |||| || || | |||||||| |
Sbjct 606924 TGTTGGAGGTGTATGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGTGAAGTGGAGGCAG 606983
Query 115967 TGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGA 116026
| ||||||||||| ||||| || |||||| | ||| | | ||| ||||| |
Sbjct 606984 TTGGCATGGGTGCAATGAGCAGCGAGTTGCGTACACCGTGCTCAGCAATCTTCTCCTTCA 607043
Query 116027 GGGCGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGAT 116084
| | |||||| | || | || | || | | | ||||||||| ||||||||||
Sbjct 607044 GAGACGCCCAGTCCCAGAGGTCAG-TAGGTGT-GACATTCCACATATCGTACTGGAGGAT 607101
Query 116085 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 116144
||| ||||| | || ||||| || | |||| || ||||| ||| || | ||
Sbjct 607102 ACCCTGGGATACGGGAGATCCTTCGTAGGTCTTGTAAGGGCCAAGTTCCTTTGCGATGTC 607161
Query 116145 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTT 116204
| | | ||| || || || || || ||||| || || | || | |||
Sbjct 607162 GCATGAGGAAGTGAGAGCAGCATGGTAGATGGTCTCGAAGATTTGGATGTTGAGCTTCTT 607221
Query 116205 GGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGAC 116264
|| ||||| || || || | || ||| | || |||| || |||||||| ||
Sbjct 607222 AGCTTCGTCTGACTCGAAAGGAAGGCGGAGTGCGAGGAAGGCATCGGCAAGACCTTGAAC 607281
Query 116265 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAA 116324
||| | || || || || || | | || || || || || || ||
Sbjct 607282 ACCCATACCGATGGGTCGGTGGCGGAAGTTGCTGCGGCGTGCCTCTTCGACAGGGTAGTG 607341
Query 116325 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTT 116384
|| ||||| | | | || | || |||||| |||| ||||| ||| || |||||
Sbjct 607342 GTTGACCTCGATGATCTTGTTCAAGTTGCGGGTGACGACCTGTGTGACTTCGTGGAGCTT 607401
Query 116385 TTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAG 116444
| | | ||||| || | || | | |||| | ||| ||||| | || ||||
Sbjct 607402 CTTGAAGTCAAACACGCCGGCCTTGTAGTCGACAAAAGAAGGCAGGGCAAGAGAAGCCAA 607461
Query 116445 ATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGA 116504
|| || |||| | |||||| | | |||||||| | ||| || || |||| || ||
Sbjct 607462 GTTGCAAACAGCGACCTCATCAGGAGCGGTGTACTCCACAATCTCAGTGCACAGGTTGGA 607521
Query 116505 ACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAG 116564
|| ||||| || | |||||| || || ||| ||| || || |||||||||||
Sbjct 607522 GCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAGAG 607581
Query 116565 CATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGC 116624
|||| | || | || ||||| || || | || || || || | ||| | | ||
Sbjct 607582 CATAAAGGGGTTACCAGTCTCGGTCTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGTGC 607641
Query 116625 TGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTC 116684
| ||||| || | || || ||||| | ||| || || || || ||
Sbjct 607642 GCGAACAGTCTCGCGACCCTTGTTCTGCTTTTCGTAGCTCTCGTACAGAGCTTCGAATTC 607701
Query 116685 TTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACC 116744
|||||| | || | ||| || || || | || || | || | ||| | ||
Sbjct 607702 TTCACCGTAGACATCGGCGAGGCCAGGGCACTCGTTCGGGCACATCAGTGTCCAGTTGCC 607761
Query 116745 ACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCG 116804
|| | || ||||||||||||||||| || ||||| || || |||||||||| ||
Sbjct 607762 GTTGTCTTGGACACGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAAGAGATCGCG 607821
Query 116805 ACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 116864
| ||| | || || | || || || |||| || | || | | || || ||
Sbjct 607822 AGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAACCAAAGACGTCAGC 607881
Query 116865 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG------ACCAGCCTGGTT 116918
|||||| || || ||||| | |||| | | ||| |||| ||| ||||||
Sbjct 607882 GTGCCATGGCTCTAGGTAGATGGCGA-AGGCACCT--GGACGCTTGTTGCCACCCTGGTC 607938
Query 116919 TACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCC 116978
||||| | || || ||| |||| || ||||| ||||||| ||| | |||| ||
Sbjct 607939 GACATAGCGAGCAGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTAGATGTTCC 607998
Query 116979 ATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATA 117036
|| || || |||| || ||| | | || | | ||| | || | ||||||
Sbjct 607999 GTTAGTGCCACCGATGTATGAGCC--AGTAGCACGAATGCGGTGCACGTTGAGGCCAATA 608056
Query 117037 CCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATC 117096
|| || || ||| ||||| || || | |||| || |||| || || |||||
Sbjct 608057 CCGCCAGCGGTCTTGGAGATCAACGCACAGGTCTTGAGTGTGTCGTAAATGCCGTCGATA 608116
Query 117097 GAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCG 117156
||| |||| | ||||||||||||| ||||||||| || |||||| || |||
Sbjct 608117 CTGTCCTCCTTCATGTCGATGAGGAAGCATGACGACATTTGCGGTGATGGTGTGCCCGCG 608176
Query 117157 TTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC-CTTGGGACATCTTATCGTAGGTCTC 117215
||||| | || || | ||||| |||| ||| ||| ||||| | |||||||||||
Sbjct 608177 TTGAACAACGTCGGCGAGGCGTGTGTGAA-GTACTTTTGAGACATGTAGTCGTAGGTCTC 608235
Query 117216 CAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTG 117275
| | | ||||| || |||||||| || | | || ||||| | ||||| |||
Sbjct 608236 GATGGCTTTCTCGATGTCATCACCGTGAATGCCAACAGCAACACGCATGAGCATGTGTTG 608295
Query 117276 GGG 117278
||
Sbjct 608296 TGG 608298
Score = 91.5 bits (100), Expect = 2e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597
|||||||||||||||||||| || || ||||| ||||| ||||| ||||| ||||||
Sbjct 2203653 CCCTCGTCACGGGAGATGAGCTCGTTGGAGAATGTTAGACCGGGCATCAGACCGCGCTTC 2203712
Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657
|| | |||||| || | || || || ||||||||| ||||| ||| |||||
Sbjct 2203713 TTGAGCCAGAAGATGGAGGCGAAAGAACCGCTGAAGAAGATACCCTCAACAGCGGCGAAT 2203772
Query 127658 GCAAATAGACGCTCGGCAAA 127677
|||| || || | ||| ||
Sbjct 2203773 GCAACGAGGCGGTTGGCGAA 2203792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506992941320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |