Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13]
27 sequences; 33,499,641 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq21 233 2e-56
>seq21
Length=3333843
Score = 233 bits (258), Expect = 2e-56
Identities = 1112/1744 (64%), Gaps = 41/1744 (2%)
Strand=Plus/Minus
Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670
|||||| ||||| ||||||| || || | || || || || || || || || |
Sbjct 608299 CCCACAACACATGCTCATGCGTGTTGCTGTTGGCATTCACGGTGATGACATCGAGAAAGC 608240
Query 111671 TTTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCT 111729
| ||||| |||||| | ||||| | ||| |||| ||||| | || || | |
Sbjct 608239 CATCGAGACCTACGACTACATGTCTCAAAAGTAC-TTCACACACGCCTCGCCGACGTTGT 608181
Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789
||||||| || |||||| ||| |||||||| || ||||| || | | |||||||
Sbjct 608180 TCAACGCGGGCACACCATCACCGCAAATGTCGTCATGCTTCCTCATCGACATGAAGGAGG 608121
Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849
| ||| | |||||||||| ||| |||| ||||| ||||| ||| ||||
Sbjct 608120 ACAGTATCGACGGCATTTACGACACACTCAAGACCTGTGCGTTGATCTCCAAGACCGCTG 608061
Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTAC 111907
| ||||| || | || | || | | || | | ||| || | | || ||
Sbjct 608060 GCGGTATTGGCCTCAACGTGCACCGCATTCGTGCTACT--GGCTCATACATCGGTGGCAC 608003
Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967
|| || ||| | ||| | ||||| ||||| || |||| ||| ||| || |||||
Sbjct 608002 TAACGGAACATCTAACGGTCTCATTCCCATGCTCCGTGTATACAACAACACTGCTCGCTA 607943
Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021
||| |||| | ||| ||||| ||| || |||| |||| || ||||||||
Sbjct 607942 TGTCGACCAGGGTGGCAACAAGCGTCC--AGGTGCCT-TCGCCATCTACCTAGAGCCATG 607886
Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CG 112079
|||||| || || | | |||||||| |||| ||||| || | ||||||| ||
Sbjct 607885 GCACGCTGACGTCTTTGGTTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCG 607826
Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139
|| | ||||||||||||| |||||| |||||||| || |||||||||||| | || |
Sbjct 607825 CGCT--CGCGATCTCTTCTACGCTCTGTGGATTCCTGACCTCTTCATGAAGCGTGTCCAA 607768
Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG 112199
|| | ||||| ||| | || | || || || || || || ||| |||||| |
Sbjct 607767 GACAACGGCAACTGGACACTGATGTGCCCGAACGAGTGCCCTGGCCTCGCCGATGTCTAC 607708
Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACG--AGGAAGAAAGTCGGGCGACTGCGA 112257
||||| || || ||||| || ||| | |||| | | |||| || || | ||
Sbjct 607707 GGTGAAGAATTCGAAGCTCTGTACGAGAGCTACGAAAAGCAGAACAAGGGTCG--CGAGA 607650
Query 112258 CGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317
| || | || | | ||| | || || || || | || ||||||||||||| |
Sbjct 607649 CTGTTCGCGCACAAAAGCTTTGGTACGCCATCCTTGAGGCACAGACCGAGACTGGTAACC 607590
Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377
| | |||||| ||||| ||||| || |||| ||||| || || ||||| | ||| |
Sbjct 607589 CCTTTATGCTCTACAAGGACGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCA 607530
Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 112437
|| || |||||||| || || || || |||| | || | |||||| ||||
Sbjct 607529 TCCGCAGCTCCAACCTGTGCACTGAGATTGTGGAGTACACCGCTCCTGATGAGGTCGCTG 607470
Query 112438 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTT 112496
| || ||| | || || | || || || | ||| || | || || | |||
Sbjct 607469 TTTGCAACTTGGCTTCTCTTGCCCTGCCTTCTTTTGTCGACTACA-AGGCCGGCGTGTTT 607411
Query 112497 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATT 112556
|| | | || ||||||||||| || | ||||| ||| | |||| | ||
Sbjct 607410 GACTTCAAGAAGCTCCACGAAGTCACACAGGTCGTCACCCGCAACTTGAACAAGATCATC 607351
Query 112557 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 112616
|| || ||||| || || || || || | | ||||| || ||
Sbjct 607350 GAGGTCAACCACTACCCTGTCGAAGAGGCACGCCGCAGCAACTTCCGCCACCGACCCATC 607291
Query 112617 GGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCC 112676
||| | ||||| |||||||| || |||| ||| | |||| | || || ||
Sbjct 607290 GGTATGGGTGTTCAAGGTCTTGCCGATGCCTTCCTCGCACTCCGCCTTCCTTTCGAGTCA 607231
Query 112677 GACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAG 112736
|||||||| ||| | |||| | || || ||||| || || || || |||||
Sbjct 607230 GACGAAGCTAAGAAGCTCAACATCCAAATCTTCGAGACCATCTACCATGCTGCTCTCACT 607171
Query 112737 GCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 112796
| | || | ||| ||| ||| || || | |||| || || ||||| |
Sbjct 607170 TCCTCATGCGACATCGCAAAGGAACTTGGCCCTTACAAGACCTACGAAGGATCTCCCGTA 607111
Query 112797 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACT 112854
|| || || | || || | ||||||| |||| || | ||| | || | || ||||
Sbjct 607110 TCCCAGGGTATCCTCCAGTACGATATGT-GGAATGTCACACCTA-CTGACCTCTGGGACT 607053
Query 112855 GGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCAC 112914
||| |||| ||||| || ||| | ||| | || ||| || | || ||||
Sbjct 607052 GGGCGTCTCTGAAGGAGAAGATTGCTGAGCACGGTGTACGCAACTCGCTGCTCATTGCAC 606993
Query 112915 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACA 112974
| |||||||| |||||||| |||| || |||| || || || ||||| || || ||||
Sbjct 606992 CCATGCCAACTGCCTCCACTTCACAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACA 606933
Query 112975 CGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT- 113033
| | ||||||||| | | |||||| || ||||| | |||||||| |||
Sbjct 606932 CCTCCAACATCTATTCCCGCCGTGTCCTCGCTGGTGAGTTCCAGGTTGTCAAC--CCATG 606875
Query 113034 -CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGT 113092
| | | ||||| || || ||||| ||||| || | |||||| | | || |
Sbjct 606874 GTTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCTGAGAACATGAAGAACCGTATCAT 606815
Query 113093 GAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTA 113152
| || ||||| ||| | ||| | || || || || | |||| | ||
Sbjct 606814 CGCCGATGGAGGTTCTATTGCCAGGATTCCCAACATCCCTGAGGAGACAAAGACTCTTTA 606755
Query 113153 CCGCACAGTTTGGGAAATCAAG--ATGAAGGATGTCATTGACATGGCCGCAGATCGTGGT 113210
| || || ||||| ||| | |||||| ||||||| |||||||| || ||||||
Sbjct 606754 CAAGACCGTCTGGGAGATCTCGCAGCGAAGGA--TCATTGAGATGGCCGCTGACCGTGGT 606697
Query 113211 CGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCA 113268
|||||||| | |||| ||| | || | |||| | || || ||| ||
Sbjct 606696 GCTTTCATTGACC--AGTCTCAGTCGCTAAACATCCACATGAAGGAGCCTACTATGGGCA 606639
Query 113269 AGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACC 113328
|| || ||||||||||| | | |||||| ||||| || || || ||||| || |
Sbjct 606638 AGATCACTTCTATGCACTTTGCTGGCTGGAAGGCTGGTCTGAAGACTGGCATGTACTATC 606579
Query 113329 TCCG 113332
||||
Sbjct 606578 TCCG 606575
Score = 125 bits (138), Expect = 9e-24
Identities = 292/438 (67%), Gaps = 2/438 (0%)
Strand=Plus/Minus
Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATT 102242
|| ||| | ||||| || ||||||||||||||||||| ||||| ||| | | ||
Sbjct 2203783 CGCCTCGTTGCATTCGCCGCTGTTGAGGGTATCTTCTTCAGCGGTTCTTTCGCCTCCATC 2203724
Query 102243 TATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCT 102302
| |||||||||||||| ||||| ||||| ||||| |||||||||||||| |||||
Sbjct 2203723 TTCTGGCTCAAGAAGCGCGGTCTGATGCCCGGTCTAACATTCTCCAACGAGCTCATCTCC 2203664
Query 102303 CGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCAAATTATTGCGTATTAAA 102362
||||||||||| | ||| || || || || ||| | | | ||
Sbjct 2203663 CGTGACGAGGGCATGCACACCGACTTCGCCTGCCTTCTCTTCTCTCTCCTCGAGAACAAG 2203604
Query 102363 CCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAGAAGGGATTC 102422
|| | | ||| || | |||| | | |||||||| ||||||||| ||| |||
Sbjct 2203603 CCCAGCCCAGAGTCTGTCAGAGCTATCATCACTGAAGCCGTCGAGATTGAGCAGGAGTTC 2203544
Query 102423 ATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAGATGTCCGAATAT 102482
| || || || ||||||||||| |||| ||||| || |||| | ||||
Sbjct 2203543 TTGAGCGACGCACTACCATGCGCTCTGCTCGGCATGAACGCTACTCTCATGTGCCAATAC 2203484
Query 102483 ATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCTCCA-ATTTGGAACTC 102541
|| |||| || |||| | || || | || || | || | | | || |
Sbjct 2203483 ATCGAGTTCGTCGCTGACCGTCTGCTGTTGGCCCTC-GGCAACGTCAAGGTCTACCACGC 2203425
Query 102542 CAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGA 102601
|| || || || |||||||||||||||||| || | || ||||| |||||||||||
Sbjct 2203424 CACCAACCCCTTCGACTTCATGGAGAACATTTCTCTGGCTGGTAAGACCAACTTCTTCGA 2203365
Query 102602 AAAGAGGGTTGGGGACTA 102619
||| | || || |||||
Sbjct 2203364 GAAGCGCGTCGGCGACTA 2203347
Score = 89.7 bits (98), Expect = 6e-13
Identities = 219/326 (67%), Gaps = 21/326 (6%)
Strand=Plus/Plus
Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034
|| || ||||||||||| | | |||||| | |||| ||| || |||||||| |
Sbjct 942136 AATCCGTCCATCTCTGTTAGGATCTGGTTGAGAGTTGCTTCTCGCTCATCATTGCC---- 942191
Query 16035 ATACCACC--AGCACTGCGTTGCTTTCCCACGGCA-------TCAATCTCATCAATGAAG 16085
|||||| || |||| | | | |||||| ||||||||||||||||||
Sbjct 942192 --ACCACCGAAGTTCTGCTTCGATCGGGCACGGCCGATAGCGTCAATCTCATCAATGAAG 942249
Query 16086 ACGATGCATGGT-TGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCC 16144
| |||||| || || | || ||| || | || | || || |||||| || ||
Sbjct 942250 ATGATGCAGGGCGTGCTCTT-GCGCGCATTGGCGAACAAGTCTCGGACACGCGATGCACC 942308
Query 16145 CACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAACATTGGATGAAGGGGACATTA 16202
|||||||| |||||||| || || | | | | || || || | ||| || ||
Sbjct 942309 AACACCAACGAACATCTCGACGAACTCAGAACCACTGA-CACTGAA-GAAAGGAACGCCT 942366
Query 16203 GATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGG 16262
|| || |||||| | || ||| |||||||||||||| |||||||| || | |||
Sbjct 942367 GACTCTCCCGCAGTAGCCTTGGCAAGAAGAGTCTTACCAGTACCTGGGGATCCAGATAGG 942426
Query 16263 AGGGCACCTCGTGGAATCTTGGCGCC 16288
| ||||| || || ||||| || ||
Sbjct 942427 ATAGCACCGCGAGGGATCTTCGCACC 942452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742190499440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |