Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13]
27 sequences; 33,499,641 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq21 275 7e-69
>seq21
Length=3333843
Score = 275 bits (304), Expect = 7e-69
Identities = 1119/1740 (64%), Gaps = 35/1740 (2%)
Strand=Plus/Plus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGA 105648
|||||||||||||| || ||||| || || ||||| || || | ||||||||||
Sbjct 606575 CGGAGATAGTACATGCCAGTCTTCAGACCAGCCTTCCA-GCCAGCAAAGTGCATAGAAGT 606633
Query 105649 GAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAA 105708
|| |||| ||| || || | |||| | || | ||| ||||||||||||
Sbjct 606634 GATCTTGCCCATAGTAGGCTCCTTCATGTGGATGTTTAGCGACTGAGACTGGTCAATGAA 606693
Query 105709 GCGACCACGTTGTGCCGCCATATCAATGACATCCTTCAT--CTTGATTTCCCACACTGTG 105766
|||||| | || ||||| ||||||| |||||| | ||| ||||| || ||
Sbjct 606694 AGCACCACGGTCAGCGGCCATCTCAATGA--TCCTTCGCTGCGAGATCTCCCAGACGGTC 606751
Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTG--AATTGAACCCCCCG 105824
||| ||| |||| | || || ||||| | || || || || ||| ||||| ||
Sbjct 606752 TTGTAAAGAGTCTTTGTCTCCTCAGGGATGT-TGGGA-ATCCTGGCAATAGAACCTCCAT 606809
Query 105825 CCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGA 105884
| || || | | |||||| | || ||||| ||||| || | || || ||||
Sbjct 606810 CGGCGATGATACGGTTCTTCATGTTCTCAGACCACAGACCCATGTCGACAAGGTCCTTGA 606869
Query 105885 CGAG--ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTT 105942
| ||| |||||||| | ||||| || |||||| | | |||||||||
Sbjct 606870 GCAACCATGG--GTTGACAACCTGGAACTCACCAGCGAGGACACGGCGGGAATAGATGTT 606927
Query 105943 CGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGG 106002
| ||||| || || ||||| || || || |||| || |||| |||||||| |||||
Sbjct 606928 GGAGGTGTATGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGTGAAGTGGAGGCAGTTGG 606987
Query 106003 CATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAAC 106062
||| ||||| || | || ||| || | ||| | || || ||||| |||
Sbjct 606988 CATGGGTGCAATGAGCAGCGAGTTGCGTACACCGTGCTCAGCAATCTTCTCCTTCAGAGA 607047
Query 106063 ATCCCAGTCGTAGTTG--AGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCT 106120
||||||| || | || | ||| | || |||| ||||||| | || || | ||
Sbjct 607048 CGCCCAGTCCCAGAGGTCAG-TAGGTGTGACATTCC-ACATATCGTACTGGAGGATACCC 607105
Query 106121 TGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAG 106180
||||| |||||| || || | |||| || | || | | | || | || ||
Sbjct 607106 TGGGATACGGGAGATCCTTCGTAGGTCTTGTAAGGGCCAAGTTCCTTTGCGATGTCGCAT 607165
Query 106181 CTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCT 106240
| || | || || || ||||| || ||||| | || | || ||| |||
Sbjct 607166 GAGGAAGTGAGAGCAGCATGGTAGATGGTCTCGAAGATTTGGATGTTGAGCTTCTTAGCT 607225
Query 106241 TCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCC 106300
|| ||||| || || | |||| | || |||| || |||||||||||||||
Sbjct 607226 TCGTCTGACTCGAAAGGAAGGCGGAGTGCGAGGAAGGCATCGGCAAGACCTTGAACACCC 607285
Query 106301 AAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTT 106360
| ||| || |||| ||| || | || || || || || || || ||
Sbjct 607286 ATACCGATGGGTCGGTGGCGGAAGTTGCTGCGGCGTGCCTCTTCGACAGGGTAGTGGTTG 607345
Query 106361 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 106420
|| |||| ||| | || ||| || | || ||||| ||| || || || |
Sbjct 607346 ACCTCGATGATCTTGTTCAAGTTGCGGGTGACGACCTGTGTGACTTCGTGGAGCTTCTTG 607405
Query 106421 TAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTG 106480
| ||||| || | || | | |||| | || ||||| | || ||||| |||
Sbjct 607406 AAGTCAAACACGCCGGCCTTGTAGTCGACAAAAGAAGGCAGGGCAAGAGAAGCCAAGTTG 607465
Query 106481 CAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTC 106540
|||||||| |||||| | | |||||||| | ||| || || |||| |||||| ||
Sbjct 607466 CAAACAGCGACCTCATCAGGAGCGGTGTACTCCACAATCTCAGTGCACAGGTTGGAGCTG 607525
Query 106541 TTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATG 106600
|| || || | ||||| ||||| ||||| |||||| || ||||||||||||||
Sbjct 607526 CGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATA 607585
Query 106601 TAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGCTGGT 106660
|||| | || ||||| ||||||| || || || || | ||| | | || |
Sbjct 607586 AAGGGGTTACCAGTCTCGGTCTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGTGCGCGA 607645
Query 106661 ACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTC 106719
||| | || | ||| | || | ||||| | ||| || ||||| || || ||
Sbjct 607646 ACAGTCTCG-CGACCCTTGTTCTGCTTTTCGTAGCTCTCGTACAGAGCTTCGAATTCTTC 607704
Query 106720 ACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACC 106779
||| | |||| ||| || || || || || || | || | ||| | ||
Sbjct 607705 ACCGTAGACATCGGCGAGGCCAGGGCACTCGTTCGGGCACATCAGTGTCCAGTTGCCGTT 607764
Query 106780 CTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACA 106839
|| | || ||||||||||| ||||| ||||||||||| | | |||||||| | |
Sbjct 607765 GTCTTGGACACGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAAGAGATCGCGAGC 607824
Query 106840 CCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTG 106899
|| |||| || | || ||||| || | |||||||| | | || || |||||
Sbjct 607825 GCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAACCAAAGACGTCAGCGTG 607884
Query 106900 CCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTAC 106953
||||||||| || |||| |||| | || | ||||| ||| | || | ||
Sbjct 607885 CCATGGCTCTAGGTAGATGGCGAAGGCACC---TGGACGCTTGTTGCCACCCTGGTCGAC 607941
Query 106954 ATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATT 107013
|||||| || ||| ||| |||| || ||||| ||||| | ||| | ||| || ||
Sbjct 607942 ATAGCGAGCAGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTAGATGTTCCGTT 608001
Query 107014 TGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCC 107071
|| || |||| || ||| | | || | | || | || | ||||||||
Sbjct 608002 AGTGCCACCGATGTATGAG--CCAGTAGCACGAATGCGGTGCACGTTGAGGCCAATACCG 608059
Query 107072 CCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAG 107131
||||| ||| ||||| |||||| | | || || | || || |||| ||| |
Sbjct 608060 CCAGCGGTCTTGGAGATCAACGCACAGGTCTTGAGTGTGTCGTAAATGCCGTCGATACTG 608119
Query 107132 TCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTG 107191
|||||||| || |||| |||||||| ||||| |||||| |||||| || || |||
Sbjct 608120 TCCTCCTTCATGTCGATGAGGAAGCATGACGACATTTGCGGTGATGGTGTGCCCGCGTTG 608179
Query 107192 AAGAGGGTTGGTGTTGCGTGAATGAACATAC-CTTGGGACATCTTGTCGTATGTCTCCAA 107250
|| | || || | ||||| |||| ||| ||| ||||| | |||||| ||||| |
Sbjct 608180 AACAACGTCGGCGAGGCGTGTGTGAA-GTACTTTTGAGACATGTAGTCGTAGGTCTCGAT 608238
Query 107251 GACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGG 107310
| | || ||||| || ||||| ||||| | || |||||||| | ||||| ||| ||
Sbjct 608239 GGCTTTCTCGATGTCATCACCGTGAATGCCAACAGCAACACGCATGAGCATGTGTTGTGG 608298
Score = 107 bits (118), Expect = 2e-18
Identities = 299/454 (66%), Gaps = 16/454 (4%)
Strand=Plus/Plus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| || || |||||||| |||||||||||||| ||| | || |||||| |||||
Sbjct 2203347 TAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTACCAGCCAGAGAAATGTTCTCCATG 2203406
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA---TGG-GTGGCACC---CCAACTTGTTTGAG 117098
||||| || || || | |||| | | || || || ||||| ||
Sbjct 2203407 AAGTCGAAGGGGTTGGTGGCGTGGTAGACCTTGACGTTGCCGAGGGCCAAC-------AG 2203459
Query 117099 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 117158
||||| || | || |||| ||||| | | |||| || |||||| |||| ||
Sbjct 2203460 CAGACGGTCAGCGACGAACTCGATGTATTGGCACATGAGAGTAGCGTTCATGCCGAGCAG 2203519
Query 117159 ATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 117218
| ||||| |||||||| | |||| | | ||||||||| || || || | | |||
Sbjct 2203520 AGCGCATGGTAGTGCGTCGCTCAAGAACTCCTGCTCAATCTCGACGGCTTCAGTGATGAT 2203579
Query 117219 GGCGTGGATAGTTTCGGTAGTGGGTCTATTA-CGCAAAGTCTTGAAGAGCTCCACGGCAA 117277
|| || || || | |||| | || || || |||||| ||| |
Sbjct 2203580 AGCTCTGACAGACTCTGGGCTGGGCTTGTTCTCGAGGAGAGA-GAAGAGAAGGCAGGCGA 2203638
Query 117278 ACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCA 117337
| || ||| | ||||| || ||||| || || || || ||||| ||| || ||||
Sbjct 2203639 AGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAATGTTAGACCGGGCA 2203698
Query 117338 TGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCT 117397
| ||||| |||||||| | ||| | || | | ||| || ||| ||||||||||||||
Sbjct 2203699 TCAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAACCGCTGAAGAAGATACCCT 2203758
Query 117398 CCACACACGCAAACGCAAAAAGGCGCTCGGCGAA 117431
| ||| || || |||| ||||| | ||||||
Sbjct 2203759 CAACAGCGGCGAATGCAACGAGGCGGTTGGCGAA 2203792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980600881480
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