Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13] 27 sequences; 33,499,641 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 8e-12 >seq4 Length=1691321 Score = 86.0 bits (94), Expect = 8e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 44428 GACTTCATTGGTATGGACATGGCGCGAAAATTCTTGGAGATGGGTTTTACAAGAGCACGT 44487 ||||||||||| ||||||||| | || ||||||||| ||||||| | || || ||| Sbjct 178764 GACTTCATTGGCATGGACATGTCTCGCAAATTCTTGCAGATGGGCATGACTAGGGCAAAG 178705 Query 44488 CGCTATGCTAATCATTCCAGTGGAAGGAAGTACGATAAAATGTCTGG 44534 | ||||| || ||| || | ||||| ||||| ||||||| | |||| Sbjct 178704 AGATATGCAAACCATGCCGGGGGAAGAAAGTATGATAAAAAGACTGG 178658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610396593991080