Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13]
27 sequences; 33,499,641 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq21 282 5e-71
>seq21
Length=3333843
Score = 282 bits (312), Expect = 5e-71
Identities = 1120/1740 (64%), Gaps = 33/1740 (2%)
Strand=Plus/Minus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
|||||| ||||| ||||||| || || | ||||| ||||| || ||||| || |
Sbjct 608299 CCCACAACACATGCTCATGCGTGTTGCTGTTGGCATTCACGGTGATGACATCGAGAAAGC 608240
Query 75271 CTTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCT 75329
| | ||||| |||||| | ||||| ||| ||| |||| ||||| | || || | |
Sbjct 608239 CATCGAGACCTACGACTACATGTCTCAAAAGTAC-TTCACACACGCCTCGCCGACGTTGT 608181
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
|||| || || |||||| |||||| ||||| |||||||| |||| || |||||||
Sbjct 608180 TCAACGCGGGCACACCATCACCGCAAATGTCGTCATGCTTCCTCATCGACATGAAGGAGG 608121
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
|| ||| |||| || || | || || | | |||||| ||||| ||| ||||
Sbjct 608120 ACAGTATCGACGGCATTTACGACACACTCAAGACCTGTGCGTTGATCTCCAAGACCGCTG 608061
Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-AC 75507
| |||||||| | || | || | | || | | ||| || |||| || ||
Sbjct 608060 GCGGTATTGGCCTCAACGTGCACCGCATTCGTGCTACTGG--CTCATACATCGGTGGCAC 608003
Query 75508 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 75567
|| || ||| | ||| | ||||| ||||| || |||| ||| ||| || |||||
Sbjct 608002 TAACGGAACATCTAACGGTCTCATTCCCATGCTCCGTGTATACAACAACACTGCTCGCTA 607943
Query 75568 TGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATG 75621
||| | || | || ||||| ||| | || |||| ||||| | || |||||
Sbjct 607942 TGTCGACCAGGGTGGCAACAAGCGTCC--AGGTG-CCTTCGCCATCTACCTAGAGCCATG 607886
Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCG 75681
||| || || || | | |||||||| | || ||||| || | || |||| ||
Sbjct 607885 GCACGCTGACGTCTTTGGTTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCG 607826
Query 75682 GTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741
| | |||||||| | | ||||||||||| ||||| ||||||||||| || | ||
Sbjct 607825 CGCTCGCGATCTCTTCTACGCTCTGTGGATTCCTGACCTCTTCATGAAGCGTGTCCAAGA 607766
Query 75742 GGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGG 75801
|| | ||| | || | || || || || || || ||| |||| | ||
Sbjct 607765 CAACGGCAACTGGACACTGATGTGCCCGAACGAGTGCCCTGGCCTCGCCGATGTCTACGG 607706
Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGT 75861
||| || || ||||| || ||| | || ||| || || | | | ||||||
Sbjct 607705 TGAAGAATTCGAAGCTCTGTACGAGAGCTACGAAAAGCAGAACAAGGGTCGCGAGACTGT 607646
Query 75862 ACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921
| || | ||||| | || || || | ||||||| |||||||| | || |
Sbjct 607645 TCGCGCACAAAAGCTTTGGTACGCCATCCTTGAGGCACAGACCGAGACTGGTAACCCCTT 607586
Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981
|||||| |||||||| ||||| ||| ||||| ||||| ||||| | || || |||
Sbjct 607585 TATGCTCTACAAGGACGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCCG 607526
Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041
||||| || || ||||| || ||| | |||||||| | | |||||| ||||||||
Sbjct 607525 CAGCTCCAACCTGTGCACTGAGATTGTGGAGTACACCGCTCCTGATGAGGTCGCTGTTTG 607466
Query 76042 CAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTA 76101
||| ||||| || | ||||| || | |||| | | || | || ||||| |
Sbjct 607465 CAACTTGGCTTCTCTTGCCCTGCCTTCTTTTGTCGACTACAAGGCCGGCGTGTTTGACTT 607406
Query 76102 TGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAG 76161
| || || || ||| ||||| || | || ||| || | ||| |||| ||
Sbjct 607405 CAAGAAGCTCCACGAAGTCACACAGGTCGTCACCCGCAACTTGAACAAGATCATCGAGGT 607346
Query 76162 AAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTT 76221
|| || || || || || || || | || ||| |||| || ||| |
Sbjct 607345 CAACCACTACCCTGTCGAAGAGGCACGCCGCAGCAACTTCCGCCACCGACCCATCGGTAT 607286
Query 76222 GGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGA 76281
||||||||||||||| || |||| || | |||| | || || ||||| ||
Sbjct 607285 GGGTGTTCAAGGTCTTGCCGATGCCTTCCTCGCACTCCGCCTTCCTTTCGAGTCAGACGA 607226
Query 76282 AGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAG 76341
||| ||| || | || | ||||| || ||||| || || || | || |
Sbjct 607225 AGCTAAGAAGCTCAACATCCAAATCTTCGAGACCATCTACCATGCTGCTCTCACTTCCTC 607166
Query 76342 TTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCA 76401
|| || | || | | | || | || |||| | || || ||||||| |||||
Sbjct 607165 ATGCGACATCGCAAAGGAACTTGGCCCTTACAAGACCTACGAAGGATCTCCCGTATCCCA 607106
Query 76402 AGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT--CAACTACGACTGGGAT 76459
|| | || |||| ||||||| |||| || | ||| | || | || |||||||
Sbjct 607105 GGGTATCCTCCAGTACGATATGT-GGAATGTCACACCTA-CTGACCTCTGGGACTGGGCG 607048
Query 76460 GTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATG 76519
||| ||||| || ||| | ||| | || ||| || | || ||||| |||
Sbjct 607047 TCTCTGAAGGAGAAGATTGCTGAGCACGGTGTACGCAACTCGCTGCTCATTGCACCCATG 606988
Query 76520 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACA 76579
||||| |||||||| |||| || |||| || || || ||||| || |||||||| |
Sbjct 606987 CCAACTGCCTCCACTTCACAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACACCTCC 606928
Query 76580 AACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTC 76639
|||||||| | | |||||| |||||||| |||||||| | ||
Sbjct 606927 AACATCTATTCCCGCCGTGTCCTCGCTGGTGAGTTCCAGGTTGTCAACCCATGGTTGCTC 606868
Query 76640 AATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCG 76699
|| ||||| | || ||||| ||||| || | |||||| | | || | |
Sbjct 606867 AAGGACCTTGTCGACATGGGTCTGTGGTCTGAGAACATGAAGAACCGTATCATCGCCGAT 606808
Query 76700 GGTGGTTCCATT--CAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCA 76757
|| ||||| ||| || || || || | ||||| || || | |||| ||| ||| |
Sbjct 606807 GGAGGTTCTATTGCCAGGAT-TCCCA-ACATCCCTGAGGAGACAAAGACTCTTTACAAGA 606750
Query 76758 CAGTGTGGGAAATCAAG--ATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTT 76815
| || ||||| ||| | ||| || ||||||| |||||||| || |||||| ||
Sbjct 606749 CCGTCTGGGAGATCTCGCAGCGAAGGA--TCATTGAGATGGCCGCTGACCGTGGTGCTTT 606692
Query 76816 CATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTC 76873
|||||| | |||| ||| | || | |||| | || || ||| |||| ||
Sbjct 606691 CATTGACC--AGTCTCAGTCGCTAAACATCCACATGAAGGAGCCTACTATGGGCAAGATC 606634
Query 76874 TCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932
|||||||||| | || || ||||| || || || || || ||||||||||||||
Sbjct 606633 ACTTCTATGCACTTTGCTGGC-TGGAAGGCTGGTCTGAAGACTGGCATGTACTATCTCCG 606575
Score = 107 bits (118), Expect = 2e-18
Identities = 299/454 (66%), Gaps = 16/454 (4%)
Strand=Plus/Minus
Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130
|||||| | ||||| |||| || || ||| ||||||||||||||| ||| || |||
Sbjct 2203792 TTCGCCAACCGCCTCGTTGCATTCGCCGCTGTTGAGGGTATCTTCTTCAGCGGTTCTTTC 2203733
Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190
| | || | ||| | |||||||| ||||| ||||| || ||| ||||| || ||
Sbjct 2203732 GCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTGATGCCCGGTCTAACATTCTCCAACGAG 2203673
Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTG 65250
|| || ||||| || ||||| | ||| || || ||| |||||| ||
Sbjct 2203672 CTCATCTCCCGTGACGAGGGCATGCACACCGACTTCGCCTGCCTTCTCTTC-TCTCTCCT 2203614
Query 65251 CG-TAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGA 65309
|| || | |||| | || || || || ||| | | || || || ||||||||
Sbjct 2203613 CGAGAACAAGCCCAGCCCAGAGTCTGTCAGAGCTATCATCACTGAAGCCGTCGAGATTGA 2203554
Query 65310 GAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGAT 65369
| | | |||| | |||||||| ||||| ||| |||| |||||| || ||
Sbjct 2203553 GCAGGAGTTCTTGAGCGACGCACTACCATGCGCTCTGCTCGGCATGAACGCTACTCTCAT 2203494
Query 65370 GTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG---GGTGCCAC- 65425
|| | | ||||| |||| || | || ||||| || ||||| || ||
Sbjct 2203493 GTGCCAATACATCGAGTTCGTCGCTGACCGTCTGCT-------GTTGGCCCTCGGCAACG 2203441
Query 65426 CCA---TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGA 65482
|| | | |||| | || || || ||||| ||||| |||||| || | ||| |
Sbjct 2203440 TCAAGGTCTACCACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCTCTGGCTGGTA 2203381
Query 65483 AGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
||||||||||||| |||||||| || || |||||
Sbjct 2203380 AGACCAACTTCTTCGAGAAGCGCGTCGGCGACTA 2203347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569398657760
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