Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13]
27 sequences; 33,499,641 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq21 212 6e-50
seq23 113 4e-20
>seq21
Length=3333843
Score = 212 bits (234), Expect = 6e-50
Identities = 970/1524 (64%), Gaps = 56/1524 (4%)
Strand=Plus/Plus
Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567
||||| || ||||| || | || || || || |||||| |||| | ||||| ||
Sbjct 606887 ACCTGGAACTCACCAGCGAGGACACGGCGGGAATAGATGTTGGAGGTGTATGGCTCGAAG 606946
Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627
| |||||||| ||||||||||| | |||| || || |||||| || | | ||
Sbjct 606947 CACTCGTTGTTGCCCAGAATCTGTGAAGTGGAGGCAGTTGGCATGGGTGCAATGAGCAGC 607006
Query 138628 GAATTCCGTAAACCGTGA--AGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAAT 138685
|| || |||| |||||| ||| ||| ||||| || |||| ||||||||| | |
Sbjct 607007 GAGTTGCGTACACCGTGCTCAGCAATCTTC--TCCTTCAGAGACGCCCAGTCCCAGAGGT 607064
Query 138686 CGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTT 138745
| ||||| | ||||||||||||||||| | || ||| | ||||| ||||
Sbjct 607065 CAGTAGGTGTGACATTCCACATATCGTACTGGAGGATACCCTGGGATACGGGAGATCCTT 607124
Query 138746 CGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCAT 138805
|||| | | ||| |||| || | || | ||| | ||| ||| |||
Sbjct 607125 CGTAGGTCTTGTAAGGGCCAAGTTCCTTTGCGATGTCGCATGAGGAAGTGAGAGCAGCAT 607184
Query 138806 AGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCA 138865
||| || || ||| || || |||||| || ||| | |||| | || |
Sbjct 607185 GGTAGATGGTCTCGAAGATTTGGATGTTGAGCTTCTTAGCTTCGTCTGACTCGAAAGGAA 607244
Query 138866 TGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGC 138925
|||||| ||| || ||||| || ||||| || |||| |||| || || ||||
Sbjct 607245 GGCGGAGTGCGAGGAAGGCATCGGCAAGACCTTGAACACCCATACCGATGGGTCGGTGGC 607304
Query 138926 GCAGATTTGACGCTTT-TGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTT 138984
| | | ||| || ||| |||||| ||| || | ||| || |||||||| |||||
Sbjct 607305 GGA-AGTTGCTGCGGCGTGCCTCTTCGACAGGGTAGTGGTTGACCTCGATGATCTTGTTC 607363
Query 138985 AAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCC 139043
|| || || ||| |||| || | | | | | | | | || || | ||| |
Sbjct 607364 AAGTTGCGGGTGACGACCTGTGT-GACTTCGTGGAGCTTCTTGAAGTCAAACACGCCGGC 607422
Query 139044 GTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGC 139103
|||| |||||| | | || | | || | || || | |||||| || ||
Sbjct 607423 CTTGTAGTCGACAAA----AGAAGGCAG--GGCAAGA---GAAGCCAAGTTGCAAACAGC 607473
Query 139104 CACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGT 139163
|| || || || || |||| || ||||| || | |||| || | ||| ||
Sbjct 607474 GACCTCATCAGGAGCGGTGTACTCCACAATCTCAGTGCACAGGTTGGAGCTGCGGATGGT 607533
Query 139164 ACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGT 139223
||| | || | || ||||| || ||||| ||||| || ||||| |||||| | || |
Sbjct 607534 ACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATAAAGGGGTT 607593
Query 139224 GCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGACG 139283
||||| || |||| ||| | ||| | | ||| ||||| | | |
Sbjct 607594 ACCAGTCTCGGTCTGTGCCTCAAGGATGGCGT--ACCAA------AGCTTTTGT-----G 607640
Query 139284 CACGTAAAGT-TCGTCGCGCTCGTACT---TTTCGTAGAGTTCGT---------CGAATC 139330
| || | ||| ||| | || || || |||||||| |||| |||||
Sbjct 607641 CGCGAACAGTCTCGCGACCCTTGTTCTGCTTTTCGTAGCTCTCGTACAGAGCTTCGAATT 607700
Query 139331 GTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGC 139390
|||||||||| | || | || | | |||| || || ||||| || | ||| ||
Sbjct 607701 CTTCACCGTAGACATCGGCGAGGCCAGGGCACTCGTTCGGGCACATCAGTGTCCAGTTGC 607760
Query 139391 CGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGC 139450
|||| | | ||| ||| ||||||| || || |||||||||| |||| | | | |||||
Sbjct 607761 CGTTGTCTTGGACACGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAAGAGATCGC 607820
Query 139451 GCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAG 139510
| || || ||| || ||| || || ||||||| |||| |||||||
Sbjct 607821 GAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAACCAAAGACGTCAG 607880
Query 139511 CGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGA 139567
|||||||||| || || |||||||| | || ||| || ||| ||||| || ||||
Sbjct 607881 CGTGCCATGGCTCTAGGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGA 607940
Query 139568 CGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGT 139627
| | || ||| || ||| |||| || | ||| || |||||| | | ||||||||
Sbjct 607941 CATAGCGAGCAGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTAGATGTTCCGT 608000
Query 139628 TGGTGCTACGGATGG----GACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATT 139683
| |||| || |||| | | || ||| || | | || || |||| ||| ||
Sbjct 608001 TAGTGCCACCGATGTATGAGCCAGT----AGCACGAATGCGGTGCACGTTGAGGCCAATA 608056
Query 139684 CCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATATACCTCTTAT 139742
||||| | ||||| || || | || || | | ||| ||||| || || ||
Sbjct 608057 CCGCCAGCGGTCTTGGAGATCAACGCACAGGTCTTG-AGTGTGTCGTAAATGCCGTCGAT 608115
Query 139743 GCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGC 139802
||||| |||| ||| || || ||||||||||| | ||||||| | ||||| ||
Sbjct 608116 ACTGTCCTCCTTCATGTCGATGAGGAAGCATGACGACATTTGCGGTGATGGTGTGCCCGC 608175
Query 139803 TGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTC 139862
|||| || || ||||| ||||| | || ||||| | ||||| || ||
Sbjct 608176 GTTGAACAACGTCGGCGAGGCGTGTGTGAAGTACTTTTGAGACATGTAGTCGTAGGTCTC 608235
Query 139863 GATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTG 139922
|||||| || | || || ||||| || || |||| || ||||| ||||| |||||
Sbjct 608236 GATGGCTTTCTCGATGTCATCACCGTGAATGCCAACAGCAACACGCATGAGCATGTGTTG 608295
Query 139923 GATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTA 139982
|| ||||| ||| ||| | || ||||| | ||| || |||||| |
Sbjct 608296 TGGGCGCTCGGCGACCTTGCCGTTTATGCGGAGGAGATATGAGCGCTCAAGTGTCTTGAA 608355
Query 139983 GCCAAAGTACCTATAGTTGAAATC 140006
|||||| || |||||||| ||
Sbjct 608356 ACCAAAGAACTGGTAGTTGAAGTC 608379
>seq23
Length=2828041
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || || || || || || || |||||||| || ||| | | |
Sbjct 925495 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACCATCACGCTCGAGGTGGAATCAAGC 925554
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||||||||| || || || ||||| || |||
Sbjct 925555 GACACTATTGACAACGTCAAGTCGAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAA 925614
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| ||||| || ||| |||| || | | | || || || |||
Sbjct 925615 CAGCGTCTCATCTTCGCCGGAAAGCAGTTGGAAGACGGCCGTACTCTCTCCGACTACAAC 925674
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| |||||||| || ||||| |||||||||
Sbjct 925675 ATCCAAAAGGAGTCCACACTTCACTTGGTG 925704
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || ||||| || || ||||| | ||||| || | | |
Sbjct 925723 ATGCAGATCTTTGTCAAGACTCTTACCGGAAAGACCATTACATTGGAAGTCGAGTCTAGC 925782
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | ||||| |||||||| ||||| || || || ||||| || ||
Sbjct 925783 GACACGATCGACAATGTAAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 925842
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | || || || || || |||||||| || ||| | ||||| || |||
Sbjct 925843 CAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAAGACGGCCGAACGCTCTCAGACTACAAC 925902
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || ||||| || || || |||||||||
Sbjct 925903 ATCCAGAAGGAGTCTACTCTCCACTTGGTG 925932
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
||||| || || || || || || || || | ||||||| | || | || || |
Sbjct 925291 ACCGGCAAGACCATCACTCTTGAGGTTGAGTCATCCGACACCATCGACAACGTCAAGTCA 925350
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||||||||| || || || ||||| ||||| ||||| | ||||| ||||| ||
Sbjct 925351 AAGATCCAAGACAAGGAGGGCATCCCTCCGGATCAGCAACGCCTTATCTTCGCCGGAAAG 925410
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|| || ||||| | | | |||| || || |||||||| ||||| || ||||| |||
Sbjct 925411 CAACTCGAGGACGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACACTGCAC 925470
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
| || | || ||||||| ||
Sbjct 925471 CTTGTCCTCCGCCTGCGCGGTGG 925493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897448159560
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