Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13]
27 sequences; 33,499,641 total letters
Query= NC_023423.1
Length=610033
Score E
Sequences producing significant alignments: (Bits) Value
seq22 98.7 4e-15
>seq22
Length=2852027
Score = 98.7 bits (108), Expect = 4e-15
Identities = 152/207 (73%), Gaps = 10/207 (5%)
Strand=Plus/Minus
Query 309643 ACCCTCTCGCCCCTCAAAG-CTCCAACCTTCGAT-GC-GACAATCTCCATCAACTTGGCG 309699
||||||| | ||| || | | || ||||| || || |||| ||| ||||| | |||
Sbjct 2620593 ACCCTCTTGTCCCGTAATGGCACCGACCTTGGAGAGCAGACA--CTCGATCAAATGGGCA 2620536
Query 309700 ATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCAGGTCTCATTCCGGTG 309759
|| ||||||||||| |||||||| | |||||||||| | || ||| | | ||| |
Sbjct 2620535 ATTGTCATACGAGACGGAATGGCGTGGGGGTTGATGATCAGATCCGGTGTGAGTCCC-TC 2620477
Query 309760 ATTGGGTTGAAAGGCATATCTTCTTCA-GGTACAATCAAACCAATAGTTCCCTTTTGAGC 309818
||| ||| ||||||||||| | |||| | | |||||| |||||||||||| |
Sbjct 2620476 CCTGGA--GAATGGCATATCTTCCTGGCGGTAGG-TGATACCAATGGTTCCCTTTTGACC 2620420
Query 309819 GTGCCTGGAAGCAAACTTGTCACCAAT 309845
||| | ||||||||||| ||||||||
Sbjct 2620419 GTGACGAGAAGCAAACTTATCACCAAT 2620393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1951973724738856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |