Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13] 27 sequences; 33,499,641 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq22 98.7 4e-15 >seq22 Length=2852027 Score = 98.7 bits (108), Expect = 4e-15 Identities = 152/207 (73%), Gaps = 10/207 (5%) Strand=Plus/Minus Query 309643 ACCCTCTCGCCCCTCAAAG-CTCCAACCTTCGAT-GC-GACAATCTCCATCAACTTGGCG 309699 ||||||| | ||| || | | || ||||| || || |||| ||| ||||| | ||| Sbjct 2620593 ACCCTCTTGTCCCGTAATGGCACCGACCTTGGAGAGCAGACA--CTCGATCAAATGGGCA 2620536 Query 309700 ATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCAGGTCTCATTCCGGTG 309759 || ||||||||||| |||||||| | |||||||||| | || ||| | | ||| | Sbjct 2620535 ATTGTCATACGAGACGGAATGGCGTGGGGGTTGATGATCAGATCCGGTGTGAGTCCC-TC 2620477 Query 309760 ATTGGGTTGAAAGGCATATCTTCTTCA-GGTACAATCAAACCAATAGTTCCCTTTTGAGC 309818 ||| ||| ||||||||||| | |||| | | |||||| |||||||||||| | Sbjct 2620476 CCTGGA--GAATGGCATATCTTCCTGGCGGTAGG-TGATACCAATGGTTCCCTTTTGACC 2620420 Query 309819 GTGCCTGGAAGCAAACTTGTCACCAAT 309845 ||| | ||||||||||| |||||||| Sbjct 2620419 GTGACGAGAAGCAAACTTATCACCAAT 2620393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951973724738856